New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 542309870 (1.080)4 (0.060) 4/250 NT 5.8% coding (308/537 nt) PP_4763 acetyltransferase
?NC_002947 = 5423127 64 (1.040)coding (279/537 nt) PP_4763 acetyltransferase

TCGAAGCTGCCGTGCAGGTCCTGCTGCATGCCGATGGCTTGCATCACCTTTTGCGAAGGCAGGTTGCATTCGCTGGTGAACGACACGACCTCCTCCAGGCGCAATTGGGCGAAAGCACAACGCAGGCAGGTCCACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5422960‑5423098
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgccgTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGGACCTGCCTGCGTTGTGCTTTCGCCCAATTGCGCCTGGAGGAGGTCGTGTCGTTCACCAGCGAATGCAACCTGCCTTCGCAAAAGGTGATGCAAGCCATCGGCATGCAGCA  <  NC_002947/5423127‑5422981
                                                                                                                                                                                                                                                                                              
TCGAAGCTGCCGTGCAGGTCCTGCTGCATGCCGATGGCTTGCATCACCTTTTGCGAAGGCAGGTTGCATTCGCTGGTGAACGACACGACCTCCTCCAGGCGCAATTGGGCGAAAGCACAACGCAGGCAGGTCCACGCCGTCACTGGGGC                                                                                                                                           >  4:170594/1‑149
                          CATGCCGATGGCTTGCATCACCTTTTGCGAAGGCAGGTTGCATTCGCTGGTGAACGACACGACCTCCTCCAGGCGCAATTGGGCGAAAGCACAACGCAGGCAGGTCCACGCCGTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGT                                                                                                                  <  3:170594/148‑1
                                           TCACCTTTTGCGAAGGCAGGTTGCATTCGCTGGTGAACGACACGACCTCCTCCAGGCGCAATTGGGCGAAAGCACAACGCAGGCAGGTCCACGCCGTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGG                                                                                                                <  5:37515/133‑1
                                           TCACCTTTTGCGAAGGCAGGTTGCATTCGCTGGTGAACGACACGACCTCCTCCAGGCGCAATTGGGCGAAAGCACAACGCAGGCAGGTCCACGCCGTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGG                                                                                                                >  6:37515/1‑133
                                                                                                                                    CACGCCGTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGGACCTGCCTGCGTTGTGCTTTCGCCCAATTGCGCCTGGAGGAGGTCGTGTCGTTCACCAGCGAATGCAACCTGCCTTCGCAAAAGGTGATGCAAGCCATCGGCATG       <  5:197163/149‑1
                                                                                                                                     ACGCCGTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGGACCTGCCTGCGTTGTGCTTTCGCCCAATTGCGCCTGGAGGAGGTCGTGTCGTTCACCAGCGAATGCAACCTGCCTTCGCAAAAGGTGATGCAAGCCATCGGCATGC      <  2:187926/149‑1
                                                                                                                                         CGTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGGACCTGCCTGCGTTGTGCTTTCGCCCAATTGCGCCTGGAGGAGGTCGTGTCGTTCACCAGCGAATGCAACCTGCCTTCGCAAAAGGTGATGCAAGCCATCGGCATGCAGCA  <  5:185718/149‑1
                                                                                                                                                                                                                                                                                              
TCGAAGCTGCCGTGCAGGTCCTGCTGCATGCCGATGGCTTGCATCACCTTTTGCGAAGGCAGGTTGCATTCGCTGGTGAACGACACGACCTCCTCCAGGCGCAATTGGGCGAAAGCACAACGCAGGCAGGTCCACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5422960‑5423098
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgccgTCACTGGGGCCTGGGCTTTGCCAGCGAAGCGGCGTGGACCTGCCTGCGTTGTGCTTTCGCCCAATTGCGCCTGGAGGAGGTCGTGTCGTTCACCAGCGAATGCAACCTGCCTTCGCAAAAGGTGATGCAAGCCATCGGCATGCAGCA  <  NC_002947/5423127‑5422981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.