| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5629835 = | 66 (1.010) | 4 (0.060) | 4/250 | NT | 5.9% | coding (431/1629 nt) | putP | sodium/L‑proline transporter |
| ? | NC_002947 | 5629883 = | 66 (1.070) | coding (383/1629 nt) | putP | sodium/L‑proline transporter | |||||
GTTACCGCGCTGTCTGCCGGTGCCTCCGACATGAGTGGCTGGCTGCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5629986‑5629835‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGAAAGG > NC_002947/5629883‑5630029 GTTACCGCGCTGTCTGCCGGTGCCTCCGACATGAGTGGCTGGCTGCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGG < 8:106411/149‑1GTTACCGCGCTGTCTGCCGGTGCCTCCGACATGAGTGGCTGGCTGCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAG < 1:105865/148‑1 TTACCGCGCTGTCTGCCGGTGCCTCCGACATGAGTGGCTGGCTGCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGC > 6:384617/1‑149 ACCGCGCTGTCTGCCGGTGCCTCCGACATGAGTGGCTGGCTGCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCC < 2:219696/148‑1 CATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGC > 6:136339/1‑149 ATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGG > 3:227781/1‑132 ATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGG < 4:227781/132‑1 ACTGGCTGTTCGTGGCAGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCAC < 5:136339/149‑1 AGGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGG > 1:389483/1‑148 GGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCTGA > 6:393820/1‑148 GGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGAA < 8:276451/149‑1 GGCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGA > 2:128079/1‑148 GCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGA > 5:179436/1‑147 GCCGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGA > 6:376894/1‑147 CGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGAAAGG > 1:206082/1‑149 CGATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGAAAGG < 1:219696/149‑1 GTTACCGCGCTGTCTGCCGGTGCCTCCGACATGAGTGGCTGGCTGCTGATGGGCCTGCCCGGTGCCATCTACTTCGCGGGCCTGTCCGAGGCCTGGATCGCCATCGGCCTGACAGTGGGTGCCTACCTGAACTGGCTGTTCGTGGCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5629986‑5629835‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgATGGCGATCCAGGCCTCGGACAGGCCCGCGAAGTAGATGGCACCGGGCAGGCCCATCAGCAGCCAGCCACTCATGTCGGAGGCACCGGCAGACAGCGCGGTAACCACGCTACCCAGGCTGCGACCACCCAGAATGTAATCGGAAAGG > NC_002947/5629883‑5630029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |