| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5639727 | 81 (1.240) | 4 (0.070) | 4/248 | NT | 5.1% | coding (819/1320 nt) | PP_4950 | hypothetical protein |
| ? | NC_002947 | = 5639774 | 73 (1.190) | coding (866/1320 nt) | PP_4950 | hypothetical protein | |||||
CTTGCACCTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5639572‑5639727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcggcACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCTGCTCGGTAAAACTGACCAGCGGGCTAAGCCGTGCATCGCCGTTGTACAGGCGCTGCAGAGCGCTGTTGCCAGTGGCCAGGGCCTGCGCG < NC_002947/5639774‑5639628 CTTGCACCTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGT > 5:146688/1‑149CTTGCACCTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGT > 6:373931/1‑149 TTGCACCTGCGGCCATGGACGAAGTCGCCGGCATGCTGTGCTGGGGCGGATTTTCCGCGCAGGCCCTGGCCACAGGCAACAGCCCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTAAGCACGCTGGTCAGTATTACAGAGCAGGT > 3:51252/1‑148 CACCTGCGGTCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGC < 1:239290/149‑1 CACCTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGC < 4:1515/149‑1 CCTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGG < 1:16281/149‑1 CTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGC > 1:260283/1‑149 CTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGC < 1:341258/149‑1 GGCCATGCACGAAGTCGCCGGCATGTTGTGGTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTATGCAGCGCCTGTACAACGGCGATGCACGGCTTTGCCCGCTGGTCAGTTTTACCGAACAGGTCAGCGGCtagc > 8:213575/1‑145 TCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGCACATCCAGGCGCGGCGCA > 4:300157/1‑149 GCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGG > 4:346556/1‑149 GCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGAC < 3:346556/149‑1 CCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCT < 3:300157/149‑1 TCAGCGGCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCTGCTCGGTAAACCTGACGAGCGGGCTAAGCCGTGCATCGCCGTTGTACAGGCGCTGCAGAGCGCTGTTGGCACTGGGCAGGGCC > 4:16340/1‑149 AGCGGCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCTGCTCGGTAAAACTGACCAGCGGGCTAAGCCGTGCATCGCCGTTGTACAGGCGCTGCAGAGCGCTGTTGC < 7:387198/133‑1 AGCGGCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCTGCTCGGTAAAACTGACCAGCGGGCTAAGCCGTGCATCGCCGTTGTACAGGCGCTGCAGAGCGCTGTTGC > 8:387198/1‑133 GCACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCTGCTCGGTAAAACTGACCAGCGGGCTAAGCCGTGCATCGCCGTTGTACAGGCGCTGCAGAGCGCTGTTGCCAGTGGCCAGGGCATGCGCG > 6:44715/1‑149 CTTGCACCTGCGGCCATGGACGAAGTCGCCGGCATGTTGTGCTGGGGCGGCTTTTCCGCGCAGGCCCTGGCCACTGGCAACAGCGCTCTGCAGCGCCTGTACAACGGCGATGCACGGCTTAGCCCGCTGGTCAGTTTTACCGAGCAGGTCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5639572‑5639727‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcggcACATCCAGGCGCGGCGCACCTTCATCGGAAAATGCCGGGCTAAGCGAGCCGCTGACCTGCTCGGTAAAACTGACCAGCGGGCTAAGCCGTGCATCGCCGTTGTACAGGCGCTGCAGAGCGCTGTTGCCAGTGGCCAGGGCCTGCGCG < NC_002947/5639774‑5639628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |