| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5715379 = | 66 (1.010) | 4 (0.060) | 4/250 | NT | 6.0% | coding (46/378 nt) | tatB | Sec‑independent protein translocase protein TatB |
| ? | NC_002947 | 5715434 = | 63 (1.020) | coding (101/378 nt) | tatB | Sec‑independent protein translocase protein TatB | |||||
GTTATGCAGTTGGCGGCGGATGTCGTCGGCGCCTATTTCGCGCTCCACTTCCATCTTGATGCTGTTGAAGCTGCGTTTGAGCCGGCCGATCCACAGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5715528‑5715379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggcTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGACGACATCCGCCGCCAACTGCATAACGAGCACATCCTGCAGATGGAAGAGGAAGCCAAGCGTATCCTCAACCCAAT > NC_002947/5715434‑5715578 GTTATGCAGTTGGCGGCGGATGTCGTCGGCGCCTATTTCGCGCTCCACTTCCATCTTGATGCTGTTGAAGCTGCGTTTGAGCCGGCCGATCCACAGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAGG < 1:350467/148‑1 GCAGTTGGCGGCGGATGTCGTCGGCGCCTATTTCGCGCTCCACTTCCATCTTGATGCTGTTGAAGCTGCGTTTGAGCCGGCCGATCCACAGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAG > 7:285402/1‑142 GCAGTTGGCGGCGGATGTCGTCGGCGCCTATTTCGCGCTCCACTTCCATCTTGATGCTGTTGAAGCTGCGTTTGAGCCGGCCGATCCACAGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAG < 8:285402/142‑1 ACAGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAGGGCTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGCCGACATCCGCCGCCAACTGCA > 3:45793/1‑149 AGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAGGGCTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGAC < 3:130290/127‑1 AGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAGGGCTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGAC > 4:130290/1‑127 GCGGCACCCGGCAGGCGCTCGGGGCCGCGCGCACGGCAGGGCTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGACGACATCCGCCGCCAACTGCATAACGAGCACATCCTG > 7:324561/1‑149 GGGCTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGACGACATCCGCCGCCAACTGCATAACGAGCACATCCTGCAGATGGAAGAGGAAGCCAAGCGTATCCTCAACCCAAT < 2:350467/149‑1 GTTATGCAGTTGGCGGCGGATGTCGTCGGCGCCTATTTCGCGCTCCACTTCCATCTTGATGCTGTTGAAGCTGCGTTTGAGCCGGCCGATCCACAGCCCTGCCGTGCGCGCGGCACCCGGCAGGCGCTCGGGGCCGAGCAC‑CAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5715528‑5715379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggcTGTGGATCGGCCGGCTCAAACGCAGCTTCAACAGCATCAAGATGGAAGTGGAGCGCGAAATAGGCGCCGACGACATCCGCCGCCAACTGCATAACGAGCACATCCTGCAGATGGAAGAGGAAGCCAAGCGTATCCTCAACCCAAT > NC_002947/5715434‑5715578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |