| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5740403 | 62 (0.950) | 4 (0.070) | 3/246 | NT | 6.8% | coding (1333/1365 nt) | hutF | formiminoglutamate deiminase |
| ? | NC_002947 | = 5740534 | 52 (0.860) | coding (545/573 nt) | PP_5037 | lipocalin family lipoprotein | |||||
GGCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5740248‑5740403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcgtCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCGGTACGCTCAGCCCAAAAGCTGGCGCAACACCTTGGCAAACGCCCGCCCGCTT < NC_002947/5740534‑5740390 GGCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGG < 7:357244/148‑1 GCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGC > 2:337727/1‑149 GCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGC > 8:347572/1‑149 GACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGC > 6:155145/1‑149 ACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGG > 7:346368/1‑136 ACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGG < 8:346368/136‑1 AACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTG > 5:7229/1‑149 CAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGC < 6:7229/149‑1 CCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGC < 5:43600/108‑1 CCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGC > 6:43600/1‑108 GCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTTCAACCCATCGCGGGCTTGCACGCGAAGGGCTGCAACGCCACCCCGGTACGCTCCGCCCAAAAGCTGGCGCAACACCATGGCAAACGCCCCCCC > 4:298328/1‑149 GCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCGGTACGCTCAGCCCAAAAGCTGGCGCAACACCTTGGCAAACGCCCGCCCGCTT > 6:418315/1‑149 GGCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5740248‑5740403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcgtCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCGGTACGCTCAGCCCAAAAGCTGGCGCAACACCTTGGCAAACGCCCGCCCGCTT < NC_002947/5740534‑5740390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |