| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5823897 = | 83 (1.280) | 5 (0.080) | 5/252 | NT | 5.9% | coding (833/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
| ? | NC_002947 | 5823932 = | 80 (1.290) | coding (868/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase | |||||
GCGTTCATCAGGAACTCGAACGGCAGTTCATCGACTGGCAGCAGCTTCTCGCCGGCCCTGAACGGCTTGGCCAGGTTCAGGTAGTCCTTGGGCAGGCGGGTCTTCCAGGTACGCAGGATGCGCCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5824050‑5823897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAACGCCCTGCGCCTGACCGATGGCGTGGAAG > NC_002947/5823932‑5824076 GCGTTCATCAGGAACTCGAACGGCAGTTCATCGACTGGCAGCAGCTTCTCGCCGGCCCTGAACGGCTTGGCCAGGTTCAGGTAGTCCTTGGGCAGGCGGGTCTTCCAGGTACGCAGGATGCGCCCGTCGGCGAAGGTGAGCTTGCCGTG < 4:16393/149‑1 AGGATGCGCCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCGGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCC > 5:129422/1‑149 GATGCGCCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCT > 6:327532/1‑148 TGCGCCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGAT < 5:327532/149‑1 CGCCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGACCGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATG > 5:341083/1‑148 CCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCGGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAAC < 6:129422/149‑1 GCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAACGCCCTGTGCCTGACCGATGGCGTGGAAG > 4:35232/1‑149 GCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAACGCCCTGCGCCTGACCGATGGCGTGGAAG < 3:28634/149‑1 GCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAACGCCCTGCGCCTGACCGATGGCGTGGAAG > 6:365910/1‑149 GCGCATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAACGCCCTGCGCCTGACCGATGGCGTGGAAG > 7:338806/1‑149 GCGTTCATCAGGAACTCGAACGGCAGTTCATCGACTGGCAGCAGCTTCTCGCCGGCCCTGAACGGCTTGGCCAGGTTCAGGTAGTCCTTGGGCAGGCGGGTCTTCCAGGTACGCAGGATGCGCCCGTCGGCGAAGGTGAGCTTGCCGTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5824050‑5823897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcATCCTGCGTACCTGGAAGACCCGCCTGCCCAAGGACTACCTGAACCTGGCCAAGCCGTTCAGGGCCGGCGAGAAGCTGCTGCCAGTCGATGAACTGCCGTTCGAGTTCCTGATGAACGCCCTGCGCCTGACCGATGGCGTGGAAG > NC_002947/5823932‑5824076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |