New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5916596 =	73 (1.120)	5 (0.080)	5/256	NT	6.6%	coding (231/1143 nt)	argE	acetylornithine deacetylase
	?	NC_002947	5916648 =	71 (1.130)					coding (179/1143 nt)	argE	acetylornithine deacetylase

GTCCAACCGCCAGGTTATCGACCTGCTGGCCGGTTGGCTGGGCGACCTGGGTTTCAAGTGCGATATCCAGCAGGTCAGCCCCGGCAAGTTCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5916743‑5916596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTGGACTGGTCCAGCGCAGGTTGGGTACAGCTGACCGAAGGCGCGGCGATCAAGG  >  NC_002947/5916648‑5916792                                                                                                                                                                                                                                                                                                        GTCCAACCGCCAGGTTATCGACCTGCTGGCCGGTTGGCTGGGCGACCTGGGTTTCAAGTGCGATATCCAGCAGGTCAGCCCCGGCAAGTTCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAGC                                                                                                                                                   >  4:167296/1‑148     AACCGCCAGGTTATCGACCTGCTGGCCGGTTGGCTGGGCGACCTGGGTTTCAAGTGCGATATCCAGCAGGTCAGCCCCGGCAAGTTCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAG                                                                                                                                                    <  5:180025/143‑1     AACCGCCAGGTTATCGACCTGCTGGCCGGTTGGCTGGGCGACCTGGGTTTCAAGTGCGATATCCAGCAGGTCAGCCCCGGCAAGTTCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAG                                                                                                                                                    >  6:180025/1‑143                                                                                          TCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAAC                                                                <  7:329853/142‑1                                                                                          TCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAAC                                                                >  8:329853/1‑142                                                                                                             TGGCACCGGCCCGGGAGGGCTGGTGCTTCGGCTGGC‑CAGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTGGACTGGTCCAGCGCAG                                      >  2:249853/1‑149                                                                                                                 ACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTGGACTGGTCCAGCGCAGGTTG                                  >  7:93900/1‑149                                                                                                                                        TGGCCGGGCACAGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTGGACTGGTCCAGCGCAGGTTGGGTACAGCTGACCGAAGGCGCG            <  8:93900/149‑1                                                                                                                                                  CAGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTGGCCTGGTCCAGCGCAGGTTGGGTACAGCTGACCGAAGGCGCGGCGATCAAGG  >  7:374556/1‑149                                                                                                                                                   AGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTG                                                      <  5:293326/96‑1                                                                                                                                                   AGCAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTG                                                      >  6:293326/1‑96                                                                                                                                                                                                                                                                                                        GTCCAACCGCCAGGTTATCGACCTGCTGGCCGGTTGGCTGGGCGACCTGGGTTTCAAGTGCGATATCCAGCAGGTCAGCCCCGGCAAGTTCAACCTGCTGGCCAGCCGTGGCACCGGCCCGGGAGGGCTGGTGC‑TGGCCGGGCACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5916743‑5916596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcAGGTTGAACTTGCCGGGGCTGACCTGCTGGATATCGCACTTGAAACCCAGGTCGCCCAGCCAACCGGCCAGCAGGTCGATAACCTGGCGGTTGGACTGGTCCAGCGCAGGTTGGGTACAGCTGACCGAAGGCGCGGCGATCAAGG  >  NC_002947/5916648‑5916792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.