New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5955002 =	67 (1.030)	3 (0.050)	3/256	NT	4.8%	coding (1/1296 nt)	PP_5219	membrane protein
	?	NC_002947	5955047 =	54 (0.860)					intergenic (‑45/‑62)	PP_5219/elbB	membrane protein/putative hydrolase
Rejected: Frequency below/above cutoff threshold.

ACAGCCGGAAAGAATCACCGCTACTTTTTTTGTCATGCTCATTACTCCAGTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5955150‑5955002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaCAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCGGTGATTCTTTCCGGCTGTGGCGTGTATGACGGCGCCGAAATCCACGAAAGCGTGATCACGCT  >  NC_002947/5955047‑5955194                                                                                                                                                                                                                                                                                                           ACAGCCGGAAAGAATCACCGCTACTTTTTTTGTCATGCTCATTACTCCAGTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCA                                                                                                                                                      >  3:258536/1‑149        GAAAGAATCACCGCTACTTTTTTTGTCATGCTCATTACTCCAGTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCC                                                                                                                                                       >  7:271349/1‑141        GAAAGAATCACCGCTACTTTTTTTGTCATGCTCATTACTCCAGTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCC                                                                                                                                                       <  8:271349/141‑1                                                  GTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCA                                                                                                                                                      <  3:20393/100‑1                                                  GTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCA                                                                                                                                                      >  4:20393/1‑100                                                                                                      CTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCGGTGATTCTTTCCGGC                                                 >  3:93622/1‑149                                                                                                       TGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCG                                                                <  5:134451/133‑1                                                                                                       TGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCG                                                                >  6:134451/1‑133                                                                                                                                                   CCACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGTCACTGGAGTAATGAGCATGACAAAAAAAGTAGCGGTGATTCTTTCCGGCTGTGGCGTGTATGACGGCGCCGAAATCCACGAAAGCGTGATCACG    >  1:224437/1‑149                                                                                                                                                   CCACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGAAGCGGTGATTCTTTCCGGCTGTGGCGTGTATGACGGCGCCGAAATCCACGAAAGCGTGATCACG    >  5:213189/1‑149                                                                                                                                                     ACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCGGTGATTCTTTCCGGCTGTGGCGTGTATGACGGCGCCGAAATCCACGAAAGCGTGATCACGCT  >  6:220732/1‑149                                                                                                                                                     ACAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGAGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCGGTGATTCTTTCCGGCTGTGGCGTGTATGACGGCGCCGAAATCCACGAAAGCGTGATCACGCT  >  4:268197/1‑149                                                                                                                                                     ACAGGAATCCCTATGGAGACATCTGCCAAACTAGAGGACATTTAGAGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCGCTGATTCTTTCAGGCTGTGTCGTGTATGACGTCGACGAAATCCACTAAAGCGTGATCACGCT  >  8:276687/1‑149                                                                                                                                                                                                                                                                                                           ACAGCCGGAAAGAATCACCGCTACTTTTTTTGTCATGCTCATTACTCCAGTGTCGAGGCGCTAAATGTCCTCTAGTTTGGCAGATGTCGCCATAGGGATTCCTGTGGGTGCGGCCTAATCTTGGTGGATAACGCCTGAGGTCGCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5955150‑5955002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaCAGGAATCCCTATGGCGACATCTGCCAAACTAGAGGACATTTAGCGCCTCGACACTGGAGTAATGAGCATGACAAAAAAAGTAGCGGTGATTCTTTCCGGCTGTGGCGTGTATGACGGCGCCGAAATCCACGAAAGCGTGATCACGCT  >  NC_002947/5955047‑5955194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.