New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6000091 =	88 (1.350)	3 (0.050)	3/254	NT	3.5%	coding (626/1428 nt)	PP_5256	cyclic nucleotide‑binding protein
	?	NC_002947	6000130 =	81 (1.290)					coding (665/1428 nt)	PP_5256	cyclic nucleotide‑binding protein
Rejected: Frequency below/above cutoff threshold.

GGGGTTGCAAGGATGGCACTGACGCCCTGCAAGGCTTTTTCCAGCGCATCGAACACGCGCTTGGGCCGCACCTTGGCCGGGACCACCACGCTGATCGATACCCCGTGCACATCGGCCGGGCGACTGTGGTTGAGCAGCCGCGCCTTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6000241‑6000091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGCAACCCCGAAGCCGAAGGTGACGGTAAAGGCCTCGACTCTGGA  >  NC_002947/6000130‑6000277                                                                                                                                                                                                                                                                                                             GGGGTTGCAAGGATGGCACTGACGCCCTGCAAGGCTTTTTCCAGCGCATCGAACACGCGCTTGGGCCGCACCTTGGCCGGGACCACCACGCTGATCGATACCCCGTGCACATCGGCCGGGCGACTGTGGTTGAGCAGCCGCGCCTTGGC                                                                                                                                                        >  6:277597/1‑149                                                                                                              CATCGGCCGGGCGACTGTGGTTGAGCAGCCGCGCCTTGGCCGATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGC                                            >  4:140388/1‑148                                                                                                                     CGGGCGACTGTGGTTGAGCAGCCGCGCCTTGGCCGATGTGCACGGGGTATCGATCAGCGTGGTG                                                                                                                         <  7:186827/64‑1                                                                                                                     CGGGCGACTGTGGTTGAGCAGCCGCGCCTTGGCCGATGTGCACGGGGTATCGATCAGCGTGGTG                                                                                                                         >  8:186827/1‑64                                                                                                                                                    GCCGATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGCAACCCCGAAGCCGAAGGTGACGGTAAAGGCCTCGACTCT     <  5:135469/149‑1                                                                                                                                                    GCCGATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGCAACCCCGAAGCCGAAGGTGACGGTAAAGGCCTCGACTCT     <  7:286863/149‑1                                                                                                                                                       GATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGCAACCCCGAAGCCGAAGGTGACGGTAAAGGCCTCGACTCTGGA  <  1:230081/149‑1                                                                                                                                                       GATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGCAACCCCGAAGCCGAAGGTGACGGTAAAGGCCTCGACTCTGGA  <  3:106334/149‑1                                                                                                                                                       GATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGC                                                             <  7:157850/90‑1                                                                                                                                                       GATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGC                                                             >  8:157850/1‑90                                                                                                                                                                                                                                                                                                             GGGGTTGCAAGGATGGCACTGACGCCCTGCAAGGCTTTTTCCAGCGCATCGAACACGCGCTTGGGCCGCACCTTGGCCGGGACCACCACGCTGATCGATACCCCGTGCACATCGGCCGGGCGACTGTGGTTGAGCAGCCGCGCCTTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6000241‑6000091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgATGTGCACGGGGTATCGATCAGCGTGGTGGTCCCGGCCAAGGTGCGGCCCAAGCGCGTGTTCGATGCGCTGGAAAAAGCCTTGCAGGGCGTCAGTGCCATCCTTGCAACCCCGAAGCCGAAGGTGACGGTAAAGGCCTCGACTCTGGA  >  NC_002947/6000130‑6000277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.