| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6072711 = | 74 (1.140) | 4 (0.060) | 4/254 | NT | 5.7% | coding (1545/1671 nt) | PP_5327 | phosphate ABC transporter permease |
| ? | NC_002947 | 6072738 = | 62 (0.990) | coding (1518/1671 nt) | PP_5327 | phosphate ABC transporter permease | |||||
CCGGCGAAGTGGCGCCGCTGATGCTGGTAGGTGTGGTGAAGCTGGCGCCGTCGCTGCCGGTGGATGGAAACTACCCGTACCTGCACCTGGACCAGAAGATCATGCACCTGGGCTTCCACATCTATGACGTCGGCTTCCAGAGCCCGAACGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6072862‑6072711‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgtcATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCG > NC_002947/6072738‑6072879 CCGGCGAAGTGGCGCCGCTGATGCTGGTAGGTGTGGTGAAGCTGGCGCCGTCGCTGCCGGTGGATGGAAACTACCCGTACCTGCACCTGGACCAGAAGATCATGCACCTGGGCTTCCACATCTATGACGTCGGCTTCCAGAGCCCGAAC < 8:214256/149‑1 CACATCTATGACGTCGGCTTCCAGAGCCCGAACGTCATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCG > 3:42982/1‑149 ATCTATGACGTCGGCTTCCAGAGCCCGAACGTCATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGT < 1:223165/89‑1 ATCTATGACGTCGGCTTCCAGAGCCCGAACGTCATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGT > 2:223165/1‑89 CTATGACGTCGGCTTCCAGAGCCCGAACGTCATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACT > 8:186580/1‑149 GAACGTCATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCG < 7:186580/149‑1 CCGGCGAAGTGGCGCCGCTGATGCTGGTAGGTGTGGTGAAGCTGGCGCCGTCGCTGCCGGTGGATGGAAACTACCCGTACCTGCACCTGGACCAGAAGATCATGCACCTGGGCTTCCACATCTATGACGTCGGCTTCCAGAGCCCGAACGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6072862‑6072711‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgtcATAGATGTGGAAGCCCAGGTGCATGATCTTCTGGTCCAGGTGCAGGTACGGGTAGTTTCCATCCACCGGCAGCGACGGCGCCAGCTTCACCACACCTACCAGCATCAGCGGCGCCACTTCGCCGGCGGCACGGGCCACAGCG > NC_002947/6072738‑6072879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |