New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6118288 =	61 (0.940)	4 (0.060)	4/260	NT	6.2%	coding (740/1158 nt)	PP_5368	MFS transporter
	?	NC_002947	6118338 =	60 (0.940)					coding (690/1158 nt)	PP_5368	MFS transporter

GCGTAGACTTCCTCAATCGTTGTTCACGATTCTTGCCTCGGGATTGCTGAACGGTTGCCTGTATGGGCTGACGCCGATCTTTGCTGCGCAACTGGGCTTTAGTCCGGCGCAGGTCGGGCAGTTCATGGCTGTCAGCATTGCCGCCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6118437‑6118288 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAGGTACAGCATGGGTTTGATCCGGGCCTGGTTGATGTTGCTCGGCTGG  >  NC_002947/6118338‑6118485                                                                                                                                                                                                                                                                                                            GCGTAGACTTCCTCAATCGTTGTTCACGATTCTTGCCTCGGGATTGCTGAACGGTTGCCTGTATGGGCTGACGCCGATCTTTGCTGCGCAACTGGGCTTTAGTCCGGCGCAGGTCGGGCAGTTCATGGCTGTCAGCATTGCCGCCGGGC                                                                                                                                                       >  2:187257/1‑149                                                                                                GCTTTAGTCCGGCGCAGGTCGGGCAGTTCATGGCTGTCAGCATTGCCGCCGGGCTAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGT                                                        >  1:408467/1‑149                                                                                                    TAGTCCGGCGCAGGTCGGGCAGTTCATGGCTGTCAGCATTGCCGCCGGGCTAAAGCCCAGTTGCGCAGCAAAGATCGGCGTAAGCCCATAAAGGCAACCGGTCAGCAATCCCGAGCCAAGAATCGTGAAAAACGATTGAGGAAGTCTAC                                                    >  4:221279/1‑149                                                                                                         CGGCGCAGGTCTGGCAGTTCATGGCTGTCAGCATTGCCGCCGGGCTAAAGCCCATTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAG                                                <  3:221279/148‑1                                                                                                                            CATGGCTGTCAGCATTGCCGCCGGGCTAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAGGTACAGCATGGGTTTGATC                             <  2:408467/148‑1                                                                                                                                                      TAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAGGTACAGCATGGGTTTGATCCGGGCCTGGTTGATGTTGCTCGGCTGG  >  4:12875/1‑149                                                                                                                                                      TAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAGGTACAGCATGGGTTTGATCCGGGCCTGGTTGATGTTGCTCGGCTGG  >  4:333071/1‑149                                                                                                                                                      TAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAGGTACAGCATGGGTTTGATCCGGGCCTGGTTGATGTTGCTCGGCTGG  >  8:144023/1‑149                                                                                                                                                                                                                                                                                                            GCGTAGACTTCCTCAATCGTTGTTCACGATTCTTGCCTCGGGATTGCTGAACGGTTGCCTGTATGGGCTGACGCCGATCTTTGCTGCGCAACTGGGCTTTAGTCCGGCGCAGGTCGGGCAGTTCATGGCTGTCAGCATTGCCGCCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6118437‑6118288 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctAAAGCCCAGTTGCGCAGCAAAGATCGGCGTCAGCCCATACAGGCAACCGTTCAGCAATCCCGAGGCAAGAATCGTGAACAACGATTGAGGAAGTCTACGCAGGTACAGCATGGGTTTGATCCGGGCCTGGTTGATGTTGCTCGGCTGG  >  NC_002947/6118338‑6118485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.