New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 14514	58 (0.890)	3 (0.050)	3/250	NT	5.2%	coding (1185/2421 nt)	gyrB	DNA gyrase subunit B
	?	NC_002947	= 14535	55 (0.890)					coding (1206/2421 nt)	gyrB	DNA gyrase subunit B

GAAAACCGCCGTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAGGCGA  >  NC_002947/14370‑14662                                                                                                                                                 |                                                                                                                                                     gAAAACCGCCGTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGGAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGt                                                                                                                                                   >  8:368068/1‑148 (MQ=255)      ccgccgTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGt                                                                                                                                             >  8:55851/1‑149 (MQ=255)       cgccgTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTg                                                                                                                                            >  4:79739/1‑149 (MQ=255)        gccgTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTgc                                                                                                                                           >  2:245862/1‑149 (MQ=255)          cgTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTgcgc                                                                                                                                         <  7:48978/149‑1 (MQ=255)             ggAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTg                                                                                                                                       >  5:335617/1‑148 (MQ=255)              gAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGa                                                                                                                                     <  6:335617/149‑1 (MQ=255)                  aGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATc                                                                                                                                 >  8:252631/1‑149 (MQ=255)                   ggAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCg                                                                                                                                <  8:113149‑M2/149‑2 (MQ=255)                    gagaTGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCgc                                                                                                                               <  3:275179‑M2/149‑3 (MQ=255)                        tGAACAAGTACTTCGCCGATTTCCTCCTGGGAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCgcgggt                                                                                                                           >  7:368068‑M2/1‑143 (MQ=255)                            cAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCGGCCGTAAAGGTGCGCTGGATTTCGCGGGTCTGc                                                                                                                       >  6:347982/1‑149 (MQ=255)                            cAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCgatatccagcgcacctttacggcgggtcatc                                                                                                                       <  3:77839‑M1/149‑32 (MQ=255)                            cAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGc                                                                                                                       >  3:216259/1‑149 (MQ=255)                               gTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCgatatccagcgcacctttacggcgggtcatctca                                                                                                                    <  1:29977‑M1/149‑35 (MQ=255)                                     cGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCgatatccagcgcacctttacggcgggtcatctcacggg                                                                                                                <  6:318299‑M1/147‑39 (MQ=255)                                        cGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTgg                                                                                                           >  3:367236/1‑149 (MQ=255)                                         gATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGc                                                                                                          <  4:216259/149‑1 (MQ=255)                                         gATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGc                                                                                                          <  1:245862/149‑1 (MQ=255)                                         gATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGACAAGCTGGc                                                                                                          <  2:70302/149‑1 (MQ=255)                                             tcctccTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGAc                                                                                                      >  3:41572/1‑149 (MQ=255)                                               ctcctGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACt                                                                                                     <  7:130354/148‑1 (MQ=255)                                                 cctGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGcc                                                                                                  <  7:113149/149‑1 (MQ=255)                                                     gAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCaa                                                                                                >  7:484/1‑147 (MQ=255)                                                          cccGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTgg                                                                                                           >  3:130547/1‑131 (MQ=255)                                                          cccGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTgg                                                                                                           <  4:130547/131‑1 (MQ=255)                                                          cccGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAg                                                                                          >  1:381523/1‑148 (MQ=255)                                                               aCGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGTATCCt                                                                                    <  3:79739/149‑1 (MQ=255)                                                                  aGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGct                                                                                 >  1:28880/1‑149 (MQ=255)                                                                   ggCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGctc                                                                                >  3:216097/1‑149 (MQ=255)                                                                   ggCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGctc                                                                                >  7:245303/1‑149 (MQ=255)                                                                   ggCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGctc                                                                                >  6:390268/1‑149 (MQ=255)                                                                              tcgtTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCACGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTg                                                                     <  3:131923/149‑1 (MQ=255)                                                                                gtTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTa                                                                   <  4:275179/149‑1 (MQ=255)                                                                                 ttGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTgc                                                                                                                                           >  2:311423/1‑76 (MQ=255)                                                                                 ttGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTgc                                                                                                                                           <  1:311423/76‑1 (MQ=255)                                                                                    gCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCtg                                                               >  5:305903/1‑149 (MQ=255)                                                                                    gCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCt                                                                <  8:484/148‑1 (MQ=255)                                                                                       aGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCtggtg                                                            >  3:40867/1‑149 (MQ=255)                                                                                        gatgatCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCtggtg                                                            >  4:228523/1‑148 (MQ=255)                                                                                            atCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAggg                                                       <  2:28880/149‑1 (MQ=255)                                                                                             tCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGt                                                      <  8:245303/149‑1 (MQ=255)                                                                                             tCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGt                                                      <  7:252631/149‑1 (MQ=255)                                                                                             tCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGt                                                      <  4:40867/149‑1 (MQ=255)                                                                                             tCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGt                                                      <  6:115558/149‑1 (MQ=255)                                                                                                    cgcTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCcg                                               <  6:51403/149‑1 (MQ=255)                                                                                                     gcTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGTATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGCATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCcgc                                              <  7:55851/149‑1 (MQ=255)                                                                                                             ccGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCt                                      >  5:411835/1‑149 (MQ=255)                                                                                                             ccGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCt                                      >  3:218563/1‑149 (MQ=255)                                                                                                              cGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTc                                     <  4:216097/149‑1 (MQ=255)                                                                                                               gTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCg                                    <  6:305903/149‑1 (MQ=255)                                                                                                               gTGAAGCCGCCCGTAAAGCCAGTGAGATGACCAGCCGTAAAGGTGCGCTGGATATCGCCCGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCATGATCTCTCCGTACTGTACCTGGTGGAGCGTGACTCAGCGCTTGGCTCg                                    >  5:231329/1‑149 (MQ=255)                                                                                                                     ccgccCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGccttg                              >  7:382902/1‑146 (MQ=255)                                                                                                                       gccCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTCCCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCcaagca                            >  7:230447/1‑149 (MQ=255)                                                                                                                       gccCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCcaagc                             >  6:150984/1‑148 (MQ=255)                                                                                                                               aGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGc                                       >  7:343784/1‑130 (MQ=255)                                                                                                                               aGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGc                                       <  8:343784/130‑1 (MQ=255)                                                                                                                                 cccGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCgcgggtcatctcacgggctttacgggcggcttcacgggcgcgagcggcgtcgatcatcttgccaacgacggccttcgcctcgttcgggttttccaggaggaaatcggcg                    <  6:318299‑M2/147‑110 (MQ=255)                                                                                                                                  ccGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGTAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCcaagcaag                          <  7:200912/140‑1 (MQ=255)                                                                                                                                  ccGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGTAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCcaagcaag                          >  8:200912/1‑140 (MQ=255)                                                                                                                                     tGAGATGACCCGCCGTAAAGGTGCGCTGGATATCgcgggtcatctcacgggctttacgggcggcttcacgggcgcgagcggcgtcgatcatcttgccaacgacggccttcgcctcgttcgggttttccaggaggaaatcggcgaagtac              <  1:29977‑M2/149‑116 (MQ=255)                                                                                                                                     tGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACcgtc              <  5:150984/149‑1 (MQ=255)                                                                                                                                       agaTGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACggtcgt            <  4:41572/149‑1 (MQ=255)                                                                                                                                       agaTGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACcgtcgt            <  5:390268/149‑1 (MQ=255)                                                                                                                                        gaTGACCCGCCGTAAAGGTGCGCTGGATATCgcgggtcatctcacgggctttacgggcggcttcacgggcgcgagcggcgtcgatcatcttgccaacgacggccttcgcctcgttcgggttttccaggaggaaatcggcgaagtacttg           <  3:77839‑M2/149‑119 (MQ=255)                                                                                                                                          tGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTAcc         >  5:369763/1‑149 (MQ=255)                                                                                                                                           gACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTAcc         >  4:225121/1‑148 (MQ=255)                                                                                                                                            aCCCGCgatatccagcgcacctttacggcgggtcatctcacgggctttacgggcggcttcacgggcgcgagcggcgtcgatcatcttgccaacgacggccttcgcctcgttcgggtttcccaggaggaaatcggcgaagtacttgttca       >  7:368068‑M1/1‑6 (MQ=255)                                                                                                                                            aCCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTAcc         >  6:100229/1‑147 (MQ=255)                                                                                                                                             cccGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAg      >  4:26731/1‑149 (MQ=255)                                                                                                                                              ccgccgTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAgg     >  3:274383/1‑149 (MQ=255)                                                                                                                                                gcgatatccagcgcacctttacggcgggtcatctcacgggctttacgggcggcttcacgggcgcgagcggcgtcgatcatcttgccaacgacggccttcgcctcgttcgggttttccaggaggaaatcggcgaagtacttgttcatctc   <  3:275179‑M1/149‑148 (MQ=255)                                                                                                                                                 cgatatccagcgcacctttacggcgggtcatctcacgggctttacgggcggcttcacgggcgcgagcggcgtcgatcatcttgccaacgacggccttcgcctcgttcgggttttccaggaggaaatcggcgaagtacttgttcatctcc  <  8:113149‑M1/149‑149 (MQ=255)                                                                                                                                                 ccgTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAGGCGa  <  2:381523/149‑1 (MQ=255)                                                                                                                                                 ccgTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAGGCGa  >  7:296704/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                     GAAAACCGCCGTGGAACAGGAGATGAACAAGTACTTCGCCGATTTCCTCCTGGAAAACCCGAACGAGGCGAAGGCCGTCGTTGGCAAGATGATCGACGCCGCTCGCGCCCGTGAAGCCGCCCGTAAAGCCCGTGAGATGACCCGCCGTAAAGGTGCGCTGGATATCGCGGGTCTGCCGGGCAAGCTGGCCGACTGCCAAGAGAAGGATCCTGCTCTCTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGCAAGGCCGCAACCGTCGTACCCAGGCGA  >  NC_002947/14370‑14662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.