New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 205646 =54 (0.830)5 (0.080) 5/258 NT 8.7% coding (11152/26049 nt) PP_0168 putative surface adhesion protein
?NC_002947 209593 = NA (NA)coding (15099/26049 nt) PP_0168 putative surface adhesion protein

CAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGC  >  NC_002947/205498‑205794
                                                                                                                                                    |                                                                                                                                                     
agtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactgtggttgttgatcggcagaccgtctttgttggtcagcgtgatggtgtaagtgatctcaccgccttcggtcaccgaaggggtggcggtcagtttggccaccactt                                                                                                                                                       <  3:160414‑M1/1‑1 (MQ=255)
 aaCGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACAACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTc                                                                                                                                                      >  4:188997/1‑149 (MQ=255)
   cGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCgg                                                                                                                                                    >  1:390304/1‑149 (MQ=39)
         tGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCg                                                                                                                                              >  6:284502/1‑149 (MQ=39)
                aTCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGaa                                                                                                                                            >  1:186718/1‑144 (MQ=39)
                aTCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGaa                                                                                                                                            >  5:59967/1‑144 (MQ=39)
                aTCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGaa                                                                                                                                            <  2:186718/144‑1 (MQ=39)
                aTCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGaa                                                                                                                                            <  6:59967/144‑1 (MQ=39)
                 tCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAggcggc                                                                                                                                      <  7:166609/149‑1 (MQ=39)
                   aGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCga                                                                                                                                    <  7:305742/149‑1 (MQ=39)
                         ggTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCa                                                                                                                               <  2:390304/148‑1 (MQ=39)
                           tATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCCACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCACGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGCGATCACt                                                                                                                             >  8:168266/1‑148 (MQ=255)
                                aCTCGGCGGTGGATGCCAGTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCATGTGACCGACACCACCTACGAAGTGGTGTCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACAcc                                                                                                                      <  1:236913/149‑1 (MQ=255)
                                     gcggTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCg                                                                                                                                                     >  5:163468/1‑114 (MQ=39)
                                     gcggTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCg                                                                                                                                                     <  6:163468/114‑1 (MQ=39)
                                     gcggTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTaca                                                                                                                         <  4:278598/142‑1 (MQ=39)
                                     gcggTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTaca                                                                                                                         >  3:278598/1‑142 (MQ=39)
                                     gcggTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCAc                                                                                                                 <  5:284502/149‑1 (MQ=39)
                                     gcggTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCAc                                                                                                                 <  3:305858/149‑1 (MQ=39)
                                        gTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCt                                                                                                              <  2:248297/149‑1 (MQ=39)
                                                cACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCTGCGAGATCACTTACACCATCACGCTGACcaac                                                                                                       >  8:177600/1‑148 (MQ=21)
                                                  cTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACcaaca                                                                                                      >  4:143301/1‑147 (MQ=34)
                                                   tGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACcaaca                                                                                                      >  4:243485/1‑146 (MQ=34)
                                                        cGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGt                                                                                              <  6:277912/149‑1 (MQ=34)
                                                         gACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTc                                                                                             <  2:258898/149‑1 (MQ=34)
                                                            cTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGc                                                                                          >  2:222855/1‑149 (MQ=34)
                                                                gagaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGa                                                                                       <  2:213263/148‑1 (MQ=35)
                                                                 agaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGa                                                                                                  <  7:138893/136‑1 (MQ=34)
                                                                 agaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGa                                                                                                  >  8:138893/1‑136 (MQ=34)
                                                                 agaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGAt                                                                                      >  6:113884/1‑148 (MQ=37)
                                                                  gaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACAACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATc                                                                                     >  1:84613/1‑148 (MQ=37)
                                                                               ggcggcAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGAc                                                                                                           <  3:386857/113‑1 (MQ=35)
                                                                               ggcggcAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGAc                                                                                                           >  4:386857/1‑113 (MQ=35)
                                                                                  ggcAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCAtt                                                                    <  7:177600/149‑1 (MQ=37)
                                                                                               ttCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCt                                                        >  2:89322/1‑148 (MQ=37)
                                                                                                   aGTGACCGACACAACCGACGAAGTGGTCGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTCCCGAt                                                                                      >  7:302996/1‑114 (MQ=255)
                                                                                                    gTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGa                                                  >  3:48880/1‑149 (MQ=37)
                                                                                                       aCCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACgg                                               >  2:245704/1‑149 (MQ=34)
                                                                                                               caccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCg                                       <  1:222855/149‑1 (MQ=34)
                                                                                                               caccGACGAAGTGGTGGCCAAGCTGACCGAGACCCCGTCGGTCACCGAAGCCGGCGAGATCACTTACACCATCACGATGACCAACAAAGACGGTCTGCCGAACAACAACCACAGTCCATTGACATTCACGCTGACCGACGGCAAAAcc                                        >  7:164360/1‑148 (MQ=11)
                                                                                                                accGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGt                                      >  7:67268/1‑149 (MQ=34)
                                                                                                                 tcaccgaaggggtggcggtcagtttggccaccactTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGt                                      <  7:38310‑M1/113‑1 (MQ=255)
                                                                                                                 ccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGtc                                     <  5:113884/149‑1 (MQ=34)
                                                                                                                 ccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTAGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGtc                                     <  3:7465/149‑1 (MQ=21)
                                                                                                                    ccgaaggggtggcggtcagtttggccaccactTCGGTGAACGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGtcat                                   <  1:7953‑M1/116‑1 (MQ=255)
                                                                                                                    acgaAGTGGTGGCCAAGCTGACCGCGACCCAGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTCACCTTCACGCTGAGCGACGGCAAAACCGtcat                                   >  3:247570/1‑148 (MQ=21)
                                                                                                                      cacgggggggcggtcagttgggccaccactTCGGGGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCAc                                >  5:168585‑M1/31‑149 (MQ=255)
                                                                                                                       aaggggtggcggtcagtttggccaccactTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGAt                                                                                      <  7:250450‑M1/65‑1 (MQ=255)
                                                                                                                       aaggggtggcggtcagtttggccaccactTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGAt                                                                                      >  8:250450‑M1/30‑94 (MQ=255)
                                                                                                                         gtggtgGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGt                             <  3:188997/149‑1 (MQ=34)
                                                                                                                          tggtggCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCg                                                   <  1:63119/126‑1 (MQ=35)
                                                                                                                          tggtggCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCg                                                   >  2:63119/1‑126 (MQ=35)
                                                                                                                            gtggCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGcc                          >  4:158816/1‑149 (MQ=34)
                                                                                                                               gCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGc                       >  2:32739/1‑149 (MQ=34)
                                                                                                                               gCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGc                       <  1:89322/149‑1 (MQ=34)
                                                                                                                                 cAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACCACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGcc                      >  3:174418/1‑148 (MQ=21)
                                                                                                                                 cAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATAACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGcc                      >  6:123694/1‑148 (MQ=21)
                                                                                                                                   aGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCgttggcc                   <  8:67268/149‑7 (MQ=255)
                                                                                                                                    gctgcacgcgACCCCGTCGGTCACCGAAGTCGGCGAGATAACTTACACCATCACGCTGACCAACAAAGACTGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACg                  <  4:48880/143‑1 (MQ=11)
                                                                                                                                     cTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGTATTTACCTTCACGCTGa                                                      >  8:199358/1‑112 (MQ=255)
                                                                                                                                     cTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGTATTGACCTTCACGCTGa                                                      <  7:199358/112‑1 (MQ=25)
                                                                                                                                         ccGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCAcc             >  6:40104/1‑149 (MQ=35)
                                                                                                                                             gACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTgg         <  2:84613/149‑1 (MQ=34)
                                                                                                                                              aCCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACAGCCATCCCGCTGACCAACAAAGACGGTCTGCCGATCAACACCCACAGTGCATTGCCGTTCACGATGAGCGCCGGCGAAACCGTCATAACCGTGCCGGCCAACGGCCCCGTgg         >  1:71708/1‑149 (MQ=11)
                                                                                                                                                cccGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCa      >  5:233400/1‑149 (MQ=34)
                                                                                                                                                 ccGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCAc     <  1:32739/149‑1 (MQ=34)
                                                                                                                                                  cGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACt    >  3:22568/1‑149 (MQ=34)
                                                                                                                                                    TCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCGAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGc  >  2:71708‑M1/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGC  >  NC_002947/205498‑205794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.