New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1324755 = | 48 (0.740) | 4 (0.060) | 3/252 | NT | 7.2% | coding (276/897 nt) | yfdC | inner membrane protein |
? | NC_002947 | 1324815 = | 57 (0.920) | coding (216/897 nt) | yfdC | inner membrane protein |
CCTGCCAGGTTGCCAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAGTGTACGTTCC > NC_002947/1324609‑1324902 | ccTGCCAGGTTGCCAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGc < 1:67683/148‑1 (MQ=255) aaccgccacgggcggcagtgctgcacgaaatcattcgctaccagggcgaccaggagctggaacgtacacttgccgcgttgtggtggtcggcacttgccgccggcctgtccatggggctgtcgttgatggccatggggctattctacGcc < 4:90314‑M1/3‑1 (MQ=255) cTGCCAGGTTGCCAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGccc > 6:3200/1‑149 (MQ=255) ccgccacgggcggcagtgctgcacgaaatcattcgctaccagggcgaccaggagctggaacgtacacttgccgcgttgtggtggtcggcacttgccgccggcctgtccatggggctgtcgttgatggccatggggctattctacGCCCg < 4:87974‑M1/5‑1 (MQ=255) ccAGGTTGCCAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCa < 3:71240/149‑1 (MQ=255) ccAGGTTGCCAAGCAACACCACCCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCa > 4:376609/1‑149 (MQ=255) ccAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGc < 8:230058/148‑1 (MQ=255) cAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGAATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGcc > 3:141699/1‑148 (MQ=255) gCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATg < 3:392103/149‑1 (MQ=255) aaCACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCt > 7:40309/1‑149 (MQ=255) acacCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTg < 4:296090/149‑1 (MQ=255) cGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGac > 8:93431/1‑148 (MQ=255) agagGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTgg < 7:98392/149‑1 (MQ=255) ggCGTAGCAGGCGGCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCa < 5:284170/149‑1 (MQ=255) cAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAgcgc < 5:3200/149‑1 (MQ=255) cAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAgcgc > 8:7117/1‑149 (MQ=255) cGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTc < 1:282287/149‑1 (MQ=255) gTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCt < 1:108214/149‑1 (MQ=255) tCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTg > 3:87974/1‑149 (MQ=255) tCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTg < 3:376609/149‑1 (MQ=255) gAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTgg > 3:355592/1‑130 (MQ=255) gAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTgg < 4:355592/130‑1 (MQ=255) gAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTgg > 6:391298/1‑147 (MQ=255) aaGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAg > 3:340697/1‑149 (MQ=255) gagctggaacgtacacttgccgcgttgtggtggtcggcacttgccgccggcctgtccatggggctgtcgttgatggccatggggctattctacGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAggc < 7:154268‑M1/56‑1 (MQ=255) ctggaacgtacacttgccgcgttgtggtggtcggcacttgccgccggcctgtccatggggctgtcgttgatggccatggggctattctacGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAggcggg > 5:102270‑M1/91‑149 (MQ=255) gCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAggcgggc < 3:62635/149‑1 (MQ=255) ccAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAggcgggcg > 3:347144/1‑149 (MQ=255) gaacgtacacttgccgcgttgtggtggtcggcactttccgccggcctgtccatggggctgtcgttgatggccatggggctattctacGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAggcgggcg > 6:313959‑M1/88‑148 (MQ=255) gaacgtacacttgccgcgttgtggtggtcggcacttgccgccggcctgtccatggggctgtcgttgatggccatggggctattctacGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAggcgggcg > 8:154268‑M1/88‑148 (MQ=255) cAGCGCAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGt < 6:96175/149‑1 (MQ=255) ggggCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATa < 7:7117/148‑1 (MQ=255) ggCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGcc < 4:340697/149‑1 (MQ=255) gCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGccc > 5:246663/1‑149 (MQ=255) gACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCa > 6:152440/1‑149 (MQ=255) ccGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGc < 8:136614/149‑1 (MQ=255) ccGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGc < 5:152440/149‑1 (MQ=255) cgcgGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGcc > 8:90237/1‑149 (MQ=255) gcgGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGAAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACAACATGGGAACCAGCGCCTACTGGCAGGCGGCCATAGAATAGCCCCATGGCAAACACCGACAGcca > 2:364819/1‑148 (MQ=255) gCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGa < 1:194605/148‑1 (MQ=255) cGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGcccc > 4:300381/1‑142 (MQ=255) cGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGcccc < 3:300381/142‑1 (MQ=255) gTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCAGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAg > 5:298685/1‑149 (MQ=255) tCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCcgg < 7:269592/148‑1 (MQ=255) cgTGAACAGTTGCTTGCGGGCCAGGATCACTGCTAGAAAGCCCGCACTGTAGCCTATGCTGGCGACCACCTGGGCACCAGCTCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCcggcg < 6:298685/147‑1 (MQ=255) aGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGc > 6:15983/1‑149 (MQ=255) gCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGac > 4:132001/1‑149 (MQ=255) tGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGacca > 5:329088/1‑149 (MQ=255) ggCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGaccac > 3:90314/1‑149 (MQ=255) gCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGaccacc < 7:90237/149‑1 (MQ=255) gCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGacca < 3:132001/147‑1 (MQ=255) cGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGAccacca < 4:141699/149‑1 (MQ=255) ccAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAAc > 6:84766/1‑149 (MQ=255) tGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAgtg > 6:348106/1‑149 (MQ=255) cAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAGTGTa > 7:308169/1‑149 (MQ=255) cAAGAAAGACCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAgtg < 5:348106/147‑1 (MQ=255) gAAAGCCCGCACTGTACCCCATGCTGGCGACCACCTGGGCACCAGCGCCTACTGGCACGCGGGCCTAGAATAGCCCCATCGCCATCAACGACAGCCCCATGGACAGGCAGGCGGCAAGTCCCGAACACCACAACGCGCCAAGTGTACGt > 4:58925/1‑149 (MQ=255) aaGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAGTGTACGTTc < 8:308169/149‑1 (MQ=255) aaGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAGTGTACGTTc > 1:249917/1‑149 (MQ=255) aGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAGTGTACGTTcc < 7:93431/149‑1 (MQ=255) | CCTGCCAGGTTGCCAAGCAACACCACGCCCCAGAGGCGTAGCAGGCGTCCGAAGTTGGCCAGCGTAGGGGCGGTCATGACGGGCAGCACCGCGGTGAGCGTATTTTCGGTGAACAGTTGCTGGCGGGCCAGGATCACTGCAAGAAAGCCCGCACTGTAGCCGATGCTGGCGACCACCTGGGCACCAGCGCCTTCTGGCAGGCGGGCGTAGAATAGCCCCATGGCCATCAACGACAGCCCCATGGACAGGCCGGCGGCAAGTGCCGACCACCACAACGCGGCAAGTGTACGTTCC > NC_002947/1324609‑1324902 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |