New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 177672557 (0.880)6 (0.100) 5/248 NT 9.2% coding (328/501 nt) PP_1584 hypothetical protein
?NC_002947 = 1776759 65 (1.060)coding (362/501 nt) PP_1584 hypothetical protein

CGCGCCCAGGCGCAGGAGGAGGCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGAGAG  >  NC_002947/1776578‑1776871
                                                                                                                                                   |                                                                                                                                                  
cgcgCCCAGGCGCAGGAGGAGGCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGa                                                                                                                                                   >  6:180206/1‑149 (MQ=255)
    cccAGGCGCAGGAGGAGGCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATAcc                                                                                                                                               <  3:235438/149‑1 (MQ=255)
             aggaggaggCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGgtggctgcctggc                                                                                                                                       >  1:178931‑M1/1‑135 (MQ=255)
              ggaggaggCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCg                                                                                                                                     <  8:201974/149‑1 (MQ=255)
                aggaggCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGcc                                                                                                                                   >  1:235310/1‑149 (MQ=255)
                    ggCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAg                                                                                                                               <  3:190510/149‑1 (MQ=255)
                    ggCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAg                                                                                                                               <  4:127607/149‑1 (MQ=255)
                     gCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAgg                                                                                                                              >  8:309056/1‑149 (MQ=255)
                          ggTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAgg                                                                                                                         <  1:47096/149‑1 (MQ=255)
                          ggTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCAGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAgg                                                                                                                         >  3:313917/1‑149 (MQ=255)
                            tCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCa                                                                                                                       <  2:145319/149‑1 (MQ=255)
                                tGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCa                                                                                                                   >  6:11771/1‑149 (MQ=255)
                                   tCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGccc                                                                                                                                  >  3:126342/1‑131 (MQ=255)
                                   tCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGccc                                                                                                                                  <  4:126342/131‑1 (MQ=255)
                                      tGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcg                                                                                                             <  6:164473‑M2/149‑6 (MQ=255)
                                      tGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcg                                                                                                             <  7:11724‑M2/149‑6 (MQ=255)
                                       gaagaaAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgc                                                                                                            <  5:147199‑M2/149‑7 (MQ=255)
                                        aagaaagaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCTCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAgg                                                                                                                         <  7:261931/135‑1 (MQ=255)
                                        aagaaagaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAgg                                                                                                                         >  8:261931/1‑135 (MQ=255)
                                        aagaaagaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgcc                                                                                                           >  5:4959‑M2/1‑142 (MQ=255)
                                         agtaagatcgATTGCGAGTGCTGGCGCTGATGGGGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccg                                                                                                          <  4:231355‑M1/146‑43 (MQ=255)
                                         agaaagaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccg                                                                                                          <  3:62538‑M1/149‑43 (MQ=255)
                                          gaaagaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccgg                                                                                                         <  2:178931‑M1/149‑44 (MQ=255)
                                           aaagaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGcgccgc                                                                                                         >  2:380925/1‑148 (MQ=255)
                                              gaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATg                                                                                                     <  2:176244/149‑1 (MQ=255)
                                              gaTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCACCGCCATg                                                                                                     >  3:35207/1‑149 (MQ=255)
                                               aTCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATgg                                                                                                    <  2:235310/149‑1 (MQ=255)
                                                   aTTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccggg                                                                                                        >  1:317589‑M1/1‑97 (MQ=255)
                                                   aTTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccggg                                                                                                        <  2:317589‑M1/141‑45 (MQ=255)
                                                   aTTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGct                                                                                                <  6:147199/149‑1 (MQ=255)
                                                          gTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGAc                                                                                         <  7:294777/149‑1 (MQ=255)
                                                          gTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGAc                                                                                         <  3:307702/149‑1 (MQ=255)
                                                             cTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTg                                                                                      <  7:260363/149‑1 (MQ=255)
                                                                gcgcTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCt                                                                                    <  8:222422/148‑1 (MQ=255)
                                                                  gcTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTca                                                                                  >  4:54154/1‑148 (MQ=255)
                                                                    tGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAg                                                                                                                               >  2:255493/1‑101 (MQ=255)
                                                                    tGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAg                                                                                                                               <  1:255493/101‑1 (MQ=255)
                                                                    tGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCacac                                                                               >  2:263177/1‑149 (MQ=255)
                                                                      aTGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCt                                                                                    <  1:46099/142‑1 (MQ=255)
                                                                      aTGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCt                                                                                    >  2:46099/1‑142 (MQ=255)
                                                                           gCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGt                                                                        >  3:299688/1‑149 (MQ=255)
                                                                            ccGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTc                                                                       <  5:270056/149‑1 (MQ=255)
                                                                                tgctgcTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGaaa                                                                   <  7:309056/149‑1 (MQ=255)
                                                                                tgctgcTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGaaa                                                                   <  5:180206/149‑1 (MQ=255)
                                                                                tgctgcCGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGaaa                                                                   <  4:313917/149‑1 (MQ=255)
                                                                                  ctgctgGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGGCAGTTGCCCCGGCGCGGATTCCGCCGCTGTCGCGCGAGGCCAGGCAGCCACCCGCGCCGCCATTGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAAc                                                                  <  8:378142/148‑1 (MQ=255)
                                                                                   tgctgGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACg                                                                 >  2:123498/1‑148 (MQ=255)
                                                                                     ctgGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAAt                                                              >  2:18942/1‑149 (MQ=255)
                                                                                           aGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGagag                                                        <  6:233102/149‑1 (MQ=255)
                                                                                           aGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGAGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGagag                                                        >  6:224116/1‑149 (MQ=255)
                                                                                            gCGGCTGCGCGACGCAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGAGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAACCGAATCgagacc                                                       >  3:368207/1‑147 (MQ=255)
                                                                                              ggCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTg                                                     >  3:401981/1‑149 (MQ=255)
                                                                                               gctgctAGACGAAGGCGCGAAGCTGGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCGGCTGTCGCGCGAGGGCAGGGAGGCACGCGCGCCGCCATGGTGCGCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTgg                                                    <  4:368207/149‑1 (MQ=255)
                                                                                                    gcgACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAg                                               >  1:110017/1‑149 (MQ=255)
                                                                                                    gcgACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAg                                               <  5:224116/149‑1 (MQ=255)
                                                                                                     cgacgaAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAgg                                              <  2:151971/149‑1 (MQ=255)
                                                                                                     cgacgaAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAgg                                              <  7:308468/149‑1 (MQ=255)
                                                                                                     cgacgaAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAgg                                              <  6:399697/149‑1 (MQ=255)
                                                                                                            ggCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGa                                       <  1:123498/149‑1 (MQ=255)
                                                                                                            cgctcccaGCTCGCCGCCGCCGGCAGTTGCCCCGGCGCGGATCCCGCCTCTGTCGCCCGAGCCCAGGCAGCCACCCGCGCCGCCAGGGTGCTCTCCGACCTGCTCACCCGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGa                                       <  4:299688/142‑1 (MQ=21)
                                                                                                             gcgcCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGAc                                      <  8:11724/149‑1 (MQ=255)
                                                                                                                    gCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATccc                               <  4:401981/149‑1 (MQ=255)
                                                                                                                      tCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCg                              >  4:255726/1‑148 (MQ=255)
                                                                                                                       cgccgccgcCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGaa                            <  2:110017/149‑1 (MQ=255)
                                                                                                                                          cccGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaat                 >  1:317589‑M2/1‑44 (MQ=255)
                                                                                                                                          cccGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaat                 <  2:317589‑M2/141‑98 (MQ=255)
                                                                                                                                          cccGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCg         >  6:192769/1‑149 (MQ=255)
                                                                                                                                           ccGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaatcgatctttc        <  2:178931‑M2/149‑107 (MQ=255)
                                                                                                                                            cGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggccccatcagcgccagcactcgcaatcgatcttact       <  4:231355‑M2/149‑108 (MQ=255)
                                                                                                                                            cGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaatcgatctttct       <  3:62538‑M2/149‑108 (MQ=255)
                                                                                                                                            cGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGc       >  3:127616/1‑149 (MQ=255)
                                                                                                                                             ggCGCGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaatcgatctttctt      >  5:4959‑M1/1‑7 (MQ=255)
                                                                                                                                              gcgcGGgtggctgcctggcctcgggcgacagcggcggtatccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaatcgatctttcttc     <  5:147199‑M1/149‑144 (MQ=255)
                                                                                                                                              gcgcGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCga     <  2:251748/149‑1 (MQ=255)
                                                                                                                                              gcgcGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCga     <  3:54154/149‑1 (MQ=255)
                                                                                                                                              gcgcGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCga     <  6:340956/149‑1 (MQ=255)
                                                                                                                                               cgcgGgtggctgcctggcctcgggcgacagcggcggtatccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaatcgatctttcttca    <  7:11724‑M1/149‑145 (MQ=255)
                                                                                                                                               cgcgGgtggctgcctggcctcgggcgacagcggcggtatccgcgccggggcaactgacggcggcggcgagcttggcgccttcgtcgcgcagccgctggccagcagcatcggcaccatcagcgccagcactcgcaatcgatctttcttca    <  6:164473‑M1/149‑145 (MQ=255)
                                                                                                                                                gcgGATACCGCCGCTGTCGCACGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCgaga   <  3:257367/149‑1 (MQ=255)
                                                                                                                                                 cgGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGagag  >  4:109251/1‑149 (MQ=255)
                                                                                                                                                   gATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCga     >  6:12800/1‑144 (MQ=255)
                                                                                                                                                   gATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCga     <  5:12800/144‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CGCGCCCAGGCGCAGGAGGAGGCGAGGGTCCATGGTCATGAAGAAAGATCGATTGCGAGTGCTGGCGCTGATGGTGCCGATGCTGCTGGCCAGCGGCTGCGCGACGAAGGCGCCAAGCTCGCCGCCGCCGTCAGTTGCCCCGGCGCGGATACCGCCGCTGTCGCCCGAGGCCAGGCAGCCACCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGAGAG  >  NC_002947/1776578‑1776871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.