New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3190461 = | 48 (0.740) | 3 (0.050) | 3/252 | NT | 6.4% | coding (189/1380 nt) | PP_2799 | class III aminotransferase |
? | NC_002947 | 3190500 = | 42 (0.680) | coding (150/1380 nt) | PP_2799 | class III aminotransferase |
AACACATGGTTCAGATCACCCGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGT > NC_002947/3190315‑3190608 | agcacccactcttcaaccgttcagaacgatctggcggcacacattcatcccaacaccaacctggcccagcaccgagaggtcgggccactcgtgatcgccagaggtgacggcgtccgggtctttgacgagcaaggcaatgcctacatcGa > 2:117852‑M1/148‑149 (MQ=255) acacATGGTTCAGATCACCCGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAg < 1:2782/149‑1 (MQ=255) acacATGGTTCAGATCACCCGGCGACAGCGCTGCAAACTTGGCGGCGAGTGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAg < 6:306312/149‑1 (MQ=255) acaTGGTTCAGATCACCCGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGcc > 1:220195/1‑149 (MQ=255) ccactcttcaaccgttcagaacgatctggcggcactcattcatcccaacaccaacctggcccagcaccgagaggtcgggccactcgtgatcgccagaggtgacggcgtccgggtctttgacgagcaaggcaatgcctacatcGaa > 8:95405‑M1/143‑145 (MQ=255) ccactcttcaaccgttcagaacgatctggcggcactcattcatcccaacaccaacctggcccagcaccgagaggtcgggccactcgtgatcgccagaggtgacggcgtccgggtctttgacgagcaaggcaatgcctacatcGaa < 7:95405‑M1/3‑1 (MQ=255) aTGGTTCAGATCACCCAGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGccc > 3:255180/1‑148 (MQ=255) aTCACCCGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCgcgc > 1:225310/1‑149 (MQ=255) tCACCCGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCgcgc < 7:127419/148‑1 (MQ=255) cccGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCca < 6:205020/149‑1 (MQ=255) ccGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCca > 3:206530/1‑148 (MQ=255) ccGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTCAACTGAAGCCCAATGCCGCGCTCca > 1:92126/1‑148 (MQ=255) ggCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCGTGTGGCTGCAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGCCCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAg > 3:235495/1‑149 (MQ=255) gctcgccgcCAAGTTGGCAGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGccc > 4:240237/4‑148 (MQ=255) ccAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCt > 2:218569/1‑149 (MQ=255) ccAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCt > 3:363307/1‑149 (MQ=255) cTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTCAACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGa < 2:92126/149‑1 (MQ=255) cTTGGCGGCGAGCGCGGCGGCTGGCGCATTGGTCTTGTGGCGGTAGCTGGGTTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGa < 4:235495/149‑1 (MQ=255) ctcattcatcccaacaccaacctggcccagcaccgagaggtcgggccactcgtgatcgccagaggtgacggcgtccgggtctttgacgagcaaggcaatgcctacatcGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGa < 3:326614‑M1/41‑1 (MQ=255) tcattcatcccaacaccaacctggcccagcaccgagaggtcgggccactcgtgatcgccagaggtgacggcgtccgggtctttgacgagcaaggcaatgcctacatcGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGAt > 4:326614‑M1/108‑149 (MQ=255) gcggcgAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGt < 2:225310/148‑1 (MQ=255) gcggcgAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTa < 5:80878/149‑1 (MQ=255) gcagcgAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGt < 3:240237/145‑1 (MQ=255) ttcatcccaacaccaacctggcccagcaccgagaggtcgggccactcgtgatcgccagaggtgacggcgtccgggtctttgacgagcaaggcaatgcctacatcGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTa > 2:77658‑M1/105‑149 (MQ=255) aGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGTCATGGCTTCGATGTAGGCAtt < 6:52355/149‑1 (MQ=255) cgcTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGAAGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCACGACATGGCTTCGATGTAGGCATTGc > 1:272203/1‑149 (MQ=255) gcTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGcc < 4:255180/149‑1 (MQ=255) cGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTg < 2:220195/148‑1 (MQ=255) aGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGATCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCg > 3:349886/1‑148 (MQ=255) gcgcATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTc > 8:256865/1‑148 (MQ=255) gcATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCaaa < 4:206530/149‑1 (MQ=255) aTTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGa > 6:198219/1‑149 (MQ=255) tCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCg > 7:266503/1‑148 (MQ=255) cTTGTGGATGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAATCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGa > 6:254803/1‑149 (MQ=255) gCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGt < 8:266503/149‑1 (MQ=255) gCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGt > 2:20589/1‑149 (MQ=255) cTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTc < 1:20589/149‑1 (MQ=255) gAAGGTGTGGTAGTAGGGCCTTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCtt < 2:326283/122‑1 (MQ=255) gAAGCTGTGTTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCtt > 1:326283/1‑122 (MQ=255) gtgGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCAGGGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTg > 1:298927/1‑149 (MQ=255) gtagGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATc < 1:218569/148‑1 (MQ=255) tagGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCAc < 4:363307/149‑1 (MQ=255) ttGAACTGCTCGACGGCAGCATCGACCA‑GGAGCTGTTCACTGAAGCCCAATTCCGCGCTCAACAGGCCCGACATGGCTTCGATGTAGGCATTGACTTGCACGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCACGAc > 7:135869/1‑149 (MQ=255) gcaCTGCTCGACGGCAGCATCGACCA‑GTCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTAAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGAc < 2:272203/145‑1 (MQ=255) gAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCg < 6:226115/111‑1 (MQ=255) tCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGCCATGGCTTCGATGTAGGCATTTCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTg > 7:259791/1‑149 (MQ=255) gACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCt > 8:267742/1‑149 (MQ=255) cGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTgt < 7:267742/149‑2 (MQ=255) ggCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGACTGGCCCGACCACGCCGTGCTggg > 8:223562/1‑149 (MQ=255) agcaTCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACTAGTGGCCCGACCTCTCGGTGCTGGGCCa < 8:227814/149‑1 (MQ=255) gACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCTTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTg < 5:322872/148‑1 (MQ=255) ccA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGgtg > 6:379397/1‑149 (MQ=255) cA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGgtgt > 2:290748/1‑149 (MQ=255) ggCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTg > 6:158842/1‑149 (MQ=255) cgcTCTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTggg > 3:292127/1‑149 (MQ=255) cTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGat < 7:223562/149‑1 (MQ=255) ctcTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGatgaat < 3:206145/146‑1 (MQ=255) tGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGt > 5:390855/1‑149 (MQ=255) tGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGt > 6:307696/1‑149 (MQ=255) | AACACATGGTTCAGATCACCCGGCGCCAGCGCTGCCAACTTGGCGGCGAGCGCTGCGGCAGGCGCATTGGTCTTGTGGCTGAAGCTGTGGTAGTAGGGCAGTTGCTTGAACTGCTCGACGGCAGCATCGACCA‑GGCGCTGTTCACTGAAGCCCAATGCCGCGCTCCACAGGCCCGACATGGCTTCGATGTAGGCATTGCCTTGCTCGTCAAAGACCCGGACGCCGTCACCTCTGGCGATCACGAGTGGCCCGACCTCTCGGTGCTGGGCCAGGTTGGTGTTGGGATGAATGAGT > NC_002947/3190315‑3190608 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |