New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3837139	46 (0.710)	3 (0.050)	3/252	NT	5.9%	coding (734/2673 nt)	PP_3388	hypothetical protein
	?	NC_002947	= 3837164	51 (0.820)					coding (759/2673 nt)	PP_3388	hypothetical protein

ATGTGCTCAAGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGA  >  NC_002947/3836998‑3837286                                                                                                                                                |                                                                                                                                                    aTGTGCTCAAGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGt                                                                                                                                               >  4:296273/1‑148 (MQ=255)     gCTCAAGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGGCGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAAc                                                                                                                                           >  5:193173/1‑148 (MQ=255)      cTCAAGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCa                                                                                                                                         <  6:372384/149‑1 (MQ=255)       tCAAGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAAc                                                                                                                                           >  8:69430/1‑146 (MQ=255)         aaGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAg                                                                                                                                        <  7:317704/147‑1 (MQ=255)         aaGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAg                                                                                                                                        >  8:317704/1‑147 (MQ=255)         aaGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGAc                                                                                                                                      >  2:125489/1‑149 (MQ=255)           gCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGAcc                                                                                                                                     >  3:24931/1‑148 (MQ=255)                aCCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAAccc                                                                                                                               <  4:24931/149‑1 (MQ=255)                   aactgaactgGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGt                                                                                                                            >  5:274332/1‑149 (MQ=255)                        aactgGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTggcgc                                                                                                                       <  1:153718‑M2/149‑6 (MQ=255)                         actgGGCAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTggcgcc                                                                                                                      >  4:335981‑M2/1‑143 (MQ=255)                             ggTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGccgccg                                                                                                                                                 >  8:159530/1‑118 (MQ=255)                             ggTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGccgccg                                                                                                                                                 <  7:159530/118‑1 (MQ=255)                             ggTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCa                                                                                                                  >  3:186511/1‑149 (MQ=255)                             ggTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCa                                                                                                                  >  7:31593/1‑149 (MQ=255)                                 gCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGt                                                                                                              <  2:153718/149‑1 (MQ=255)                                   cGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCa                                                                                                            >  6:357428/1‑149 (MQ=255)                                     aCTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATc                                                                                                          <  3:296273/149‑1 (MQ=255)                                       ttCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCg                                                                                                         >  4:372593/1‑148 (MQ=255)                                           aGGCCCAGGGCGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGAt                                                                                                    <  6:193173/149‑1 (MQ=255)                                               ccAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCacggggtttggtctggttcaccggcggcgc                                                                                                                       >  3:4569‑M1/1‑96 (MQ=255)                                               ccAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCacggggtttggtctggttcaccggcggcgc                                                                                                                       <  4:4569‑M1/126‑31 (MQ=255)                                               ccAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCa                                                                                                >  1:257349/1‑149 (MQ=255)                                                   gACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCTCTTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATc                                                                                              <  1:125489/149‑1 (MQ=255)                                                           cGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTAccc                                                                                    <  7:69430/149‑1 (MQ=255)                                                               cTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTggc                                                                                                                         >  5:95538‑M2/1‑105 (MQ=255)                                                               cTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTggc                                                                                                                         <  6:95538‑M2/108‑4 (MQ=255)                                                               cTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAg                                                                                  >  2:186075/1‑147 (MQ=255)                                                                   aGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCt                                                                             >  5:297162/1‑148 (MQ=255)                                                                         tACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCacggggtttggtctggttcaccggcggcgccagg                                                                                                                   >  6:218121‑M1/1‑70 (MQ=255)                                                                           cTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCt                                                                     <  5:230222/148‑1 (MQ=255)                                                                            tGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAACCCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTgg                                                                   >  7:5674/1‑149 (MQ=255)                                                                            tGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTgg                                                                   >  5:102579/1‑149 (MQ=255)                                                                            tGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATAACCCAGGAGCTCAACGCCTgg                                                                   >  5:299297/1‑149 (MQ=255)                                                                              gACCTGCAGCCGTTCAAC‑ACGACCAGCTCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAGCCAGACCACACCCCGTGGCGCCGCCCTCGTCCTGGAAGATGCCCTCGGCATGACCAGGGCGCTCAACGCCTGgcg                                                                 >  2:256397/1‑148 (MQ=17)                                                                                    cAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATgc                                                           >  8:196696/1‑149 (MQ=255)                                                                                      gCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATgccg                                                         >  5:4004/1‑149 (MQ=255)                                                                                          ttCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGt                                                     >  8:343365/1‑149 (MQ=255)                                                                                             aacaacGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCga                                                  >  4:378867/1‑149 (MQ=255)                                                                                                   gACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGAtgt                                            <  5:357428/149‑1 (MQ=255)                                                                                                    aCCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGAtgtg                                           <  2:257349/149‑1 (MQ=255)                                                                                                    aCCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGAtgt                                            >  3:170544/1‑148 (MQ=255)                                                                                                        gATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGaaaa                                       <  6:274332/149‑1 (MQ=255)                                                                                                         aTCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGAGAACCAGACCAAACCCCCTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGCAGCTCAACGCCTGGCGCAATGCCGCCCTCGATGATTTGAAAAc                                      >  4:363349/1‑149 (MQ=18)                                                                                                                 gCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGc                              >  7:335457/1‑149 (MQ=255)                                                                                                                  ccccACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCt                             <  6:102579/149‑1 (MQ=255)                                                                                                                      acgcctcacgc‑c‑tGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGaa                         >  2:270388/1‑149 (MQ=255)                                                                                                                       cgcctcacgc‑c‑tGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAAc                        <  1:186075/149‑1 (MQ=255)                                                                                                                           tcacgc‑c‑tGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCAc                    >  6:387940/1‑149 (MQ=255)                                                                                                                               gc‑c‑tGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGtt                <  6:297162/149‑1 (MQ=255)                                                                                                                               gc‑c‑tGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCACCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGtt                <  6:299297/149‑1 (MQ=255)                                                                                                                                        cctggcGCCGCCGGTGAACCAGACCAAACCCCGTggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagta                                                      >  6:218121‑M2/1‑34 (MQ=255)                                                                                                                                        cctggcGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCg         >  3:316119/1‑149 (MQ=255)                                                                                                                                         ctggcGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGGCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCgg        >  5:218075/1‑149 (MQ=255)                                                                                                                                         ctggcGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCgg        <  1:256397/149‑1 (MQ=255)                                                                                                                                           ggcGCCacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagtagcgcctgcaggtcggcatcgtcctgggccttgaagtcggctgcccagt      >  4:335981‑M1/1‑6 (MQ=255)                                                                                                                                            gcgcCacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagtagcgcctgcaggtcggcatcgtcctgggccttgaagtcggctacccagtt     <  1:153718‑M1/149‑145 (MQ=255)                                                                                                                                            gcgcCGCCGGTGAACCAGACCAAACCCCGTggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagtagcgcctgcaggtcggcatcgtcctgg                            >  3:4569‑M2/1‑30 (MQ=255)                                                                                                                                            gcgcCGCCGGTGAACCAGACCAAACCCCGTggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagtagcgcctgcaggtcggcatcgtcctgg                            <  4:4569‑M2/126‑97 (MQ=255)                                                                                                                                            gcgcCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGc       <  4:316119/147‑1 (MQ=255)                                                                                                                                            gcgcCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGc       <  5:387940/147‑1 (MQ=255)                                                                                                                                              gccgccGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTg    >  4:171473/1‑148 (MQ=255)                                                                                                                                              gcCacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagtagcgcctgcag                                            <  6:95538‑M1/108‑106 (MQ=255)                                                                                                                                              gcCacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcaggtccagtagcgcctgcag                                            >  5:95538‑M1/1‑3 (MQ=255)                                                                                                                                               ccgccgGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGa  >  5:93961/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    ATGTGCTCAAGCACGACCAACTGAACTGGGTAGCCGACTTCAAGGCCCAGGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGC‑C‑TGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGA  >  NC_002947/3836998‑3837286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.