New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4390817 =46 (0.710)4 (0.060) 3/252 NT 8.1% coding (108/192 nt) PP_5640 hypothetical protein
?NC_002947 4390856 = 47 (0.760)coding (69/192 nt) PP_5640 hypothetical protein

GCCCGCCAAGGTCGGCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTGGTTGAC  >  NC_002947/4390672‑4390962
                                                                                                                                                 |                                                                                                                                                 
gcccgccAAGGTCGGCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGAcc                                                                                                                                                >  4:278315/1‑149 (MQ=255)
aatacatcgcggtctgcgccgccatcccgacctcgtcggtcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGAcc                                                                                                                                                >  4:120445‑M1/146‑149 (MQ=255)
  tacatcgcggtctgcgccgccatcccgacctcgtcggtcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGACCTg                                                                                                                                              >  8:91837‑M1/144‑149 (MQ=255)
      cAAGGTCGGCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTcc                                                                                                                                          >  2:319300/1‑149 (MQ=255)
         ggTCGGCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCggg                                                                                                                                       <  2:81845/149‑1 (MQ=255)
          gTCGGCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCAGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGt                                                                                                                                      <  7:322159/149‑1 (MQ=255)
             ggCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCt                                                                                                                                    <  7:64038/148‑1 (MQ=255)
               cGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCggg                                                                                                                                       >  7:45717/1‑143 (MQ=255)
               cGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCggg                                                                                                                                       <  8:45717/143‑1 (MQ=255)
                 aaaGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACtt                                                                                                                               <  2:175851/149‑1 (MQ=255)
                      ttGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAg                                                                                                                           >  3:400827/1‑148 (MQ=255)
                      ttGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAg                                                                                                                           >  3:394443/1‑148 (MQ=255)
                        gTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCACTCAGCGTTTCCGAGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGACCATGACATGCTCCGGGTCTGACTTCCAGAAc                                                                                                                        >  6:287471/1‑149 (MQ=255)
                           gACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAAcca                                                                                                                      <  2:100354/148‑1 (MQ=255)
                               ctcgtcggtcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGACCt                                                                                                                                               <  7:170608‑M1/5‑1 (MQ=255)
                               ctcgtcggtcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGACCt                                                                                                                                               >  8:170608‑M1/115‑119 (MQ=255)
                                   tcggtcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTc                                                                                                             <  1:225365‑M1/39‑1 (MQ=255)
                                       tcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTaa                                                                                                         >  3:354947‑M1/107‑149 (MQ=255)
                                       tcaaccagctggacctggcggacctgaacaacgccgcgtggacggtcgccggttttttcttggcgccggcatcagcgacgttgacggcctgatcgccacggcttacGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTaa                                                                                                         >  2:225365‑M1/107‑149 (MQ=255)
                                       cAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGt                                                                                                           >  7:156069/1‑147 (MQ=255)
                                        aGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTaa                                                                                                         <  7:200678/148‑1 (MQ=255)
                                             cgctggaccttgcggacctgaacaacgccgcgtggacggtcggcggttttttcttggcggcggcatcagcgacgttgacggcctgatcgccacggcttagGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTg                                                                                                   >  3:205789‑M1/101‑149 (MQ=255)
                                             cTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAAccaggccag                                                                                                                <  3:18009/136‑1 (MQ=255)
                                             cTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTg                                                                                                   <  3:219892/149‑1 (MQ=255)
                                             attGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAAccaggccag                                                                                                                >  4:18009/2‑136 (MQ=255)
                                              ttGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTgg                                                                                                  >  4:259418/1‑149 (MQ=255)
                                                gAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTgg                                                                                                  <  3:259418/147‑1 (MQ=255)
                                                    tGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGTTCTGACTTCCAGAAccaggcca                                                                                                                 >  4:228783/1‑128 (MQ=255)
                                                    tGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGTTCTGACTTCCAGAAccaggcca                                                                                                                 <  3:228783/128‑1 (MQ=255)
                                                      aaaCTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGAt                                                                                              <  1:319300/145‑1 (MQ=255)
                                                            gTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTc                                                                                     >  1:285477/1‑148 (MQ=255)
                                                             tCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCaa                                                                                   >  3:273606/1‑149 (MQ=255)
                                                               aGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGt                                                                                                    >  4:163798/1‑130 (MQ=255)
                                                               aGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGt                                                                                                    <  3:163798/130‑1 (MQ=255)
                                                               aGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACg                                                                                 >  6:51678/1‑149 (MQ=255)
                                                                   aTCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAAccaggccagg                                                                                                               >  1:131680/1‑115 (MQ=255)
                                                                   aTCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAAccaggccagg                                                                                                               <  2:131680/115‑1 (MQ=255)
                                                                   aTCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGc                                                                             <  5:51678/149‑1 (MQ=255)
                                                                             cTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATACTCACGTCCAGGGTGCGGCCCATGAGCTGCTCCGGGTCTGACTTCCCGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGgc                                                                   <  5:287471/149‑1 (MQ=255)
                                                                                  cGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGAt                                                                         >  8:23583/1‑138 (MQ=255)
                                                                                  cGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGAt                                                                         <  7:23583/138‑1 (MQ=255)
                                                                                  cGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCaa                                                              <  4:273606/149‑1 (MQ=255)
                                                                                   gTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGACGTGGCGATCAGGCCGTCATCGTCGCTGATGCTGGCGcc                                                                >  5:190271/1‑146 (MQ=255)
                                                                                    tttCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGa                                                            <  8:156069/149‑1 (MQ=255)
                                                                                      tCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGaa                                                           <  4:394443/148‑1 (MQ=255)
                                                                                      tCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGaa                                                           <  4:400827/148‑1 (MQ=255)
                                                                                        cgcgATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCATAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGaaaa                                                         >  5:124513/1‑148 (MQ=255)
                                                                                            aTGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCATAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCg                                                    <  6:124513/149‑1 (MQ=255)
                                                                                                gcTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGa                                                <  6:56715/149‑1 (MQ=255)
                                                                                                                      cATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAg                          >  6:325985/1‑149 (MQ=255)
                                                                                                                           tCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCg                     >  5:197896/1‑149 (MQ=255)
                                                                                                                           tCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCg                     >  5:1852/1‑149 (MQ=255)
                                                                                                                                     ggTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAg           >  6:359957/1‑149 (MQ=255)
                                                                                                                                         cGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTgg       >  7:186512/1‑149 (MQ=255)
                                                                                                                                         cGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTgg       <  5:359957/149‑1 (MQ=255)
                                                                                                                                            cccATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTGGtt     >  6:193468/1‑148 (MQ=255)
                                                                                                                                             ccATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTGGTTGa   <  6:197896/149‑1 (MQ=255)
                                                                                                                                             ccATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTGGTTGa   <  6:1852/149‑1 (MQ=255)
                                                                                                                                              cATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTGGTTGAc  >  3:161497/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GCCCGCCAAGGTCGGCGAAAGCTTGTCGACGCCGGTGATCAGCGCCTTGAGCTGAAACTTGTCAGCCATCCTCCCCCCTCAGCGTTTCCGCGATGCGCTGGCTCTGCGCGGTGGCTTCCATAATCACGTCCAGGGTGCGGCCCATGACCTGCTCCGGGTCTGACTTCCAGAACCAGGCCAGGTCGTAAGCCGTGGCGATCAGGCCGTCAACGTCGCTGATGCCGGCGCCAAGAAAAAACCGGCGACCGTCCACGCGGCGTTGTTCAGGTCCGCCAGGTCCAGCTGGTTGAC  >  NC_002947/4390672‑4390962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.