New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5160379 =67 (1.030)4 (0.070) 3/248 NT 5.6% coding (676/1212 nt) PP_4543 hypothetical protein
?NC_002947 5160418 = 72 (1.180)coding (637/1212 nt) PP_4543 hypothetical protein

CAGACTGAAAAATTCGCGCGTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGC  >  NC_002947/5160233‑5160527
                                                                                                                                                  |                                                                                                                                                      
gctttccggagcgcacatcaacttcaccgacccggcgctggacgcgcagttggcgggcctgcctgggtggatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGc                                                                                                                                                       <  4:98969‑M1/2‑1 (MQ=255)
    tccggagcgcacatcaacttcaccgacccggcgctggacgcgcagttggcgggcctgcctgggtggatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGCT‑‑cgc                                                                                                                                                 >  1:156979‑M1/143‑148 (MQ=255)
    cTGAAAAATTCGCGCGTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCTCGCCACCTGCT‑‑cgcg                                                                                                                                                <  8:222492/149‑1 (MQ=255)
     tGAAAAATTCGCGCGTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGTCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGAT‑‑Cgcgc                                                                                                                                               >  7:375785/1‑149 (MQ=255)
     tGAAAAATTCGCGCGTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑Cgcgc                                                                                                                                               >  7:8902/1‑149 (MQ=255)
        aaaaTTCGCGCGTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTcc                                                                                                                                            <  7:235669/149‑1 (MQ=255)
                 gcgTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATc                                                                                                                                   <  6:366542/149‑1 (MQ=255)
                  cgTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCt                                                                                                                                  <  1:45975/149‑1 (MQ=255)
                     cAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGc                                                                                                                                                       <  4:139545/127‑1 (MQ=255)
                     cAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGc                                                                                                                                                       >  3:139545/1‑127 (MQ=255)
                        gTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCCGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCACTCCTTGCGCATCTgcttgc                                                                                                                            >  5:369148/1‑149 (MQ=255)
                        gTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTgcttgc                                                                                                                            >  8:318240/1‑149 (MQ=255)
                                  gcgctggacgcgcagttggcgggcctgcctgggtggatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGa                                                                                                                  >  5:350889‑M1/113‑149 (MQ=255)
                                  cgacgacgCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGa                                                                                                                  <  5:153776/149‑1 (MQ=255)
                                     ctggaagcgcaggtggcgggcctgccttggtggatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggacttgctcgacagcctcaGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCt                                                                                                               >  1:68734‑M1/110‑149 (MQ=255)
                                      gacgCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTgc                                                                                                                                        >  2:97283/1‑123 (MQ=255)
                                         gCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAgg                                                                                                           >  4:326267/1‑149 (MQ=255)
                                             gctgttggcgggcctgcctgggtggattgaaagcctgggctgccagtttcactggcaaaaccggtggtatcgcgacttccaggactttctcgacagcctcaGCT‑‑cgcg                                                                                                                                                >  2:45729‑M1/102‑108 (MQ=255)
                                                  aGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCAGCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTc                                                                                                      >  1:315509/1‑145 (MQ=255)
                                                  aGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTc                                                                                                      <  2:315509/145‑1 (MQ=255)
                                                    gtgtTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGaaa                                                                                                <  5:160905/149‑1 (MQ=255)
                                                          gcatagcataGAAAGACGAACTCCCACTGAGCCTCGTCCAGTTCATCACCGCGGTACCAGCTGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCt                                                                                           <  6:202169/148‑1 (MQ=255)
                                                                    gAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTgg                                                                                         <  6:227238/140‑1 (MQ=255)
                                                                    gAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTgg                                                                                         >  5:227238/1‑140 (MQ=255)
                                                                     gatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGa                                                                                                                  <  3:135268‑M1/37‑1 (MQ=255)
                                                                     gatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGa                                                                                                                  >  4:135268‑M1/78‑114 (MQ=255)
                                                                     aaaGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGa                                                                                >  3:32165/1‑148 (MQ=255)
                                                                       aGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATAc                                                                             >  2:260111/1‑149 (MQ=255)
                                                                       aGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATAc                                                                             >  5:228660/1‑149 (MQ=255)
                                                                             aaTCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCgg                                                                       <  8:8902/149‑1 (MQ=255)
                                                                              aTCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGt                                                                      >  7:210935/1‑149 (MQ=255)
                                                                              aTCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGt                                                                      >  7:205088/1‑149 (MQ=255)
                                                                                 ccACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGttt                                                                    <  6:228660/148‑1 (MQ=255)
                                                                                  cACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTAAAGCCAACCTTCCGCAAATCATTGCGCTTGCCGTACATGAGGATGACAAGAAATACATGGAAGACGCGATACCCCCGGttt                                                                    >  1:329616/1‑149 (MQ=255)
                                                                                  cACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTg                                                                  >  6:301623/1‑149 (MQ=255)
                                                                                  cACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTg                                                                  >  6:110838/1‑149 (MQ=255)
                                                                                     tgtgCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGc                                                                 >  8:192989/1‑147 (MQ=255)
                                                                                          cTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGATGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGa                                                           >  7:332013/1‑148 (MQ=255)
                                                                                          cTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGtttc                                                          <  3:326267/149‑4 (MQ=255)
                                                                                             gTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACt                                                       <  7:318240/149‑1 (MQ=255)
                                                                                                cAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTgg                                                     >  8:189734/1‑148 (MQ=255)
                                                                                                cAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCACTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTgg                                                     <  6:369148/148‑1 (MQ=255)
                                                                                                 aGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCa                                                   >  5:13487/1‑149 (MQ=255)
                                                                                                  gTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGc                                                                 >  2:87665/1‑134 (MQ=255)
                                                                                                  gTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGc                                                                 <  1:87665/134‑1 (MQ=255)
                                                                                                  gTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAg                                                  <  1:260111/149‑1 (MQ=255)
                                                                                                  gTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAg                                                  >  6:350255/1‑149 (MQ=255)
                                                                                                  gTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAg                                                  >  1:128735/1‑149 (MQ=255)
                                                                                                     catcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTgg                                                                                         <  6:347008/107‑1 (MQ=255)
                                                                                                     catcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTgg                                                                                         >  5:347008/1‑107 (MQ=255)
                                                                                                     catcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTTTCACTGGCaaaa                                                <  4:32165/148‑4 (MQ=255)
                                                                                                     catcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTTTCACTGGCaaaa                                                <  7:192989/148‑4 (MQ=255)
                                                                                                      atcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCa                                              <  5:110838/149‑1 (MQ=255)
                                                                                                         aCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCt                                                                                           <  8:161796/101‑1 (MQ=255)
                                                                                                         aCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCt                                                                                           <  8:156360/101‑1 (MQ=255)
                                                                                                         aCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCt                                                                                           >  7:156360/1‑101 (MQ=255)
                                                                                                         aCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCt                                                                                           >  7:161796/1‑101 (MQ=255)
                                                                                                          ccGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTTTCACTGGCaa                                                  >  8:153080/1‑140 (MQ=255)
                                                                                                          ccGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTTTCACTGGCaa                                                  <  7:153080/141‑2 (MQ=255)
                                                                                                           cgcgGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGt                                         >  2:13133/1‑149 (MQ=255)
                                                                                                              ggTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtcc                                      <  8:210935/149‑1 (MQ=255)
                                                                                                              ggTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtcc                                      <  8:205088/149‑1 (MQ=255)
                                                                                                              ggTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtcc                                      <  7:14906/149‑1 (MQ=255)
                                                                                                                   cAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtccatcca                                 >  1:6490/1‑149 (MQ=255)
                                                                                                                    aGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCCGGCGTTCCATCCAc                                >  6:55662/1‑149 (MQ=255)
                                                                                                                     gCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCAcc                               >  1:62103/1‑149 (MQ=255)
                                                                                                                          aGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCcaggc                          <  6:13487/149‑1 (MQ=255)
                                                                                                                              gATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCaggcaggc                      >  8:64119/1‑149 (MQ=255)
                                                                                                                              gATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCaggcaggc                      >  1:199274/1‑149 (MQ=255)
                                                                                                                                 aCCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCCCCCAGGCAGGCCCg                   >  7:283173/1‑149 (MQ=255)
                                                                                                                                 aCCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCg                   >  8:249619/1‑149 (MQ=255)
                                                                                                                                   ccTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGc                  >  8:171014/1‑148 (MQ=255)
                                                                                                                                   ccTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGc                  >  3:285028/1‑148 (MQ=255)
                                                                                                                                   ccTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGc                  >  2:131921/1‑148 (MQ=255)
                                                                                                                                   ccTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGc                  >  5:114578/1‑148 (MQ=255)
                                                                                                                                            ccACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATTCACCCAGGCAGGCCCGCCAACTGcgcg        >  7:71105/1‑149 (MQ=255)
                                                                                                                                              aCCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCca                             >  5:301134/1‑126 (MQ=255)
                                                                                                                                              aCCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCca                             <  6:301134/126‑1 (MQ=255)
                                                                                                                                              aCCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGACCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTc      <  5:350255/149‑1 (MQ=255)
                                                                                                                                                  GCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAgc  <  1:149858‑M1/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
CAGACTGAAAAATTCGCGCGTCAGGTAGGGGGCACGACGACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCT‑‑CGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGC  >  NC_002947/5160233‑5160527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.