New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5545666	NA (NA)	76 (1.200)	63/258	NT	98.7%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	1 (0.020)					coding (20/774 nt)	PP_4939	hypothetical protein

GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGGC  >  NC_002947/5545526‑5545807                                                                                                                                              |                                                                                                                                               ggAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTa                                                                                                                                          >  3:287065/1‑147 (MQ=31) ggAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑ATGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGAGCTCCTa                                                                                                                                          >  1:331038/1‑147 (MQ=14)  gAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAg                                                                                                                                       <  3:117170/149‑1 (MQ=33)   aaCCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAgg                                                                                                                                      <  5:328585/149‑1 (MQ=34)    aCCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAggg                                                                                                                                     >  7:78304/1‑149 (MQ=35)    aCCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAggg                                                                                                                                     <  5:407827/149‑1 (MQ=35)          gCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACg                                                                                                                                <  2:387548/148‑1 (MQ=39)             aaGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAAt                                                                                                                            >  5:78304/1‑149 (MQ=255)                  ttCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCAcc                                                                                                                        <  4:17843/148‑1 (MQ=255)                   tCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑t                                                                                                                     >  4:125151/1‑149 (MQ=255)                     ggcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGt                                                                                                                   >  7:354397/1‑149 (MQ=255)                      gcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑Tgaa                                                                                                                  >  6:215256/1‑147 (MQ=255)                      gcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑Tg                                                                                                                    >  5:241550/1‑147 (MQ=255)                      gcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTa                                                                                                                  <  6:241550/149‑1 (MQ=255)                         gcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGa                                                                                                               <  6:78304/149‑1 (MQ=255)                             aCCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCgg                                                                                                           >  2:279710/1‑149 (MQ=255)                             aCCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCgg                                                                                                           <  5:215256/149‑1 (MQ=255)                                   ccGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCAc                                                                                                     <  5:280855/149‑1 (MQ=255)                                     ggATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCAccc                                                                                                   >  6:202277/1‑149 (MQ=255)                                           gTCGGCGAATGCTTTTCTAGATCTCGATGTCAGGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGaa                                                                                              >  1:54494/1‑149 (MQ=255)                                              ggCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAgg                                                                                          <  7:148823/149‑1 (MQ=255)                                               gCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGc                                                                                         >  6:30648/1‑149 (MQ=255)                                                 gAATGCTTTTCTATATCTCGATGTCA‑GTGAAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                                                       <  3:69620/149‑1 (MQ=255)                                                 gAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCAccc                                                                                                   <  1:211377/137‑1 (MQ=255)                                                 gAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCAccc                                                                                                   >  2:211377/1‑137 (MQ=255)                                                  aaTGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg                                                                                      <  4:287065/149‑1 (MQ=255)                                                   aTGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg                                                                                      <  2:127676/148‑1 (MQ=255)                                                      cTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAAc                                                                                   <  5:30648/148‑1 (MQ=255)                                                         ttCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAgg                                                                                <  5:202277/148‑1 (MQ=255)                                                              gATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTga                                                                            >  6:198240/1‑147 (MQ=255)                                                                        tCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCtt                                                                <  7:112750/149‑1 (MQ=255)                                                                          a‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGa                                                              <  2:54494/149‑1 (MQ=255)                                                                               cAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTg                                                          >  7:168625/1‑149 (MQ=255)                                                                               cAGATCTGACGTCATGCGCATCCTGGTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCATGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCt                                                           <  1:319871/149‑1 (MQ=255)                                                                                aGATCTGACGTCATGCGCATCCTTTTTGCTGTGCGACTGCGCTGCCCGGAAGGGCTGGGTGATCTCCTACAGGGTAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAAGAGGCTGTGAGTCAGCGCTTGACCTGc                                                         <  8:78304/149‑1 (MQ=37)                                                                                 gATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGcc                                                        >  3:21319/1‑149 (MQ=255)                                                                                    cTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCt                                                     >  3:169181/1‑149 (MQ=255)                                                                                     tGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCt                                                     >  8:46083/1‑148 (MQ=255)                                                                                     tGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCt                                                     >  6:39025/1‑148 (MQ=255)                                                                                       aCGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCt                                                     <  1:279710/146‑1 (MQ=255)                                                                                       aCGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGa                                                   <  7:170902/148‑1 (MQ=255)                                                                                       aCGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGa                                                   <  5:198240/148‑1 (MQ=255)                                                                                       aCGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGAc                                                  >  6:33883/1‑149 (MQ=255)                                                                                       aCGTCATGCGCATCCTGTTTGCGGTGCGACAGCGCAGCCCGGAAGGGCTGGGCGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGTAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGa                                                   <  7:2423/148‑1 (MQ=255)                                                                                            acgcgcATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCAc                                              <  8:354397/146‑1 (MQ=255)                                                                                            aTGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACg                                             >  1:357768/1‑149 (MQ=255)                                                                                                gcATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCtt                                         <  3:355834/149‑1 (MQ=255)                                                                                                 cATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTc                                        <  2:357768/149‑1 (MQ=255)                                                                                                  aTCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCtt                                         >  5:136227/1‑147 (MQ=255)                                                                                                  aTCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCtt                                         <  6:136227/147‑1 (MQ=255)                                                                                                  aTCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTc                                        >  1:89964/1‑148 (MQ=255)                                                                                                        tttGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACa                                   <  4:374360/147‑1 (MQ=255)                                                                                                             tgtgCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAAc                            >  4:13389/1‑149 (MQ=255)                                                                                                             tgtgCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAAc                            >  8:10323/1‑149 (MQ=255)                                                                                                                 cGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCg                        <  3:125151/149‑1 (MQ=255)                                                                                                                  gACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCgg                       >  7:39103/1‑149 (MQ=255)                                                                                                                  gACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCgg                       <  8:168625/149‑1 (MQ=255)                                                                                                                            cccGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGa             <  7:46083/149‑1 (MQ=255)                                                                                                                              cGGAAGGGCTGGGTGATCTCCTACAGGGGACCGCAATCACCC‑TGTAGGCGCGGGTTCCCCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAACCCCCGGTCGCCCCCGaca           >  8:292608/1‑149 (MQ=39)                                                                                                                                gAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACg         <  4:21319/149‑1 (MQ=255)                                                                                                                                  aGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGtt       <  3:13389/149‑1 (MQ=255)                                                                                                                                    ggCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGtt       >  8:324413/1‑147 (MQ=255)                                                                                                                                     gCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAg    >  6:225126/1‑149 (MQ=255)                                                                                                                                       tGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGgc  >  8:193278/1‑149 (MQ=255)                                                                                                                                       tGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGgc  >  7:369455/1‑149 (MQ=255)                                                                                                                                              tctcCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACa                               <  2:383243/113‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCA‑GTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCC‑TGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGGC  >  NC_002947/5545526‑5545807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.