| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | 89.2% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 3 (0.050) | 24 (0.380) +CGGG |
20/256 | NT | 89.2% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 3 (0.050) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑C‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGC > NC_002947/5681271‑5681555 | aCCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggg > 8:370894‑M1/1‑145 (MQ=255) ccGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccgggg < 5:158377‑M1/149‑6 (MQ=255) cGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggc > 2:361850‑M1/1‑143 (MQ=255) acaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgcgcagcagccccgg < 7:224225‑M1/149‑23 (MQ=255) aGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcg < 7:370894‑M1/149‑25 (MQ=255) tcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgc > 6:282907‑M1/1‑120 (MQ=255) tcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgc < 5:282907‑M1/132‑13 (MQ=255) ctGACGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgaca < 4:121849‑M1/147‑30 (MQ=255) ggCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgct < 1:361850‑M1/149‑40 (MQ=255) tgttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGCAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatagcgccaccaggccgctccccctccagc > 6:403270‑M1/1‑99 (MQ=255) tgttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatagcgacacaaggccgctcccactccaga > 1:301008‑M1/1‑99 (MQ=255) tgATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGTGCGCGAAGCGGCCCCACGCTTTCATTGCCACTGCATGAACCG‑Ccggggatgctgcgca > 7:335329‑M1/1‑94 (MQ=255) atccttttGGGTTCGTTCTTTGGGGGCGGGGCCTTGTGTCGCTAATGGGGCGCCACGCGGCCCCTGGCTTCCATTGCCACTCCATCAACCG‑CGGGGGCGGCTGCGCAGCCCTACCGCCACACAAGGCCGCTCCCACTCCAGAccacca < 2:255547/141‑1 (MQ=255) gCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCAATGCATGAACCGACGGG‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCCCTACCCAGACAGCCCACCAGTCCCAGCGCCGCACAAACGAACCAAGGta > 8:316381/1‑147 (MQ=16) gggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgt > 4:306401‑M1/1‑45 (MQ=255) ccccAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggtt < 2:347627‑M1/123‑92 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcc < 7:83138‑M1/70‑42 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcc > 8:83138‑M1/1‑29 (MQ=255) gCTCTCATGCCCACTCCATGACCCG‑Ccggggctgcgccgcagccctatcgccacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaat < 5:322154‑M1/149‑124 (MQ=255) gCCACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccag < 7:316381‑M1/148‑132 (MQ=255) gCCACTGCATGAACCG‑CCGGGGCTGCTGCGCCGCCCGATCGCGCCACAACGCCCCTACCACACCAGCCCACCAGGCCCGGCGCCGCCCATCCTAACCAAGGTGAGGGTGGAGATGCGCGTCACGCACCAGCCTTTACAATGCGACCAgc > 6:255268/1‑148 (MQ=255) ccACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcac > 7:205702‑M1/1‑16 (MQ=255) ccACTGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcac < 8:205702‑M1/126‑111 (MQ=255) tGCATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagcccacccggccctgcgccggacatcctaaccaaggtcaggtttcagatccgcgtcacgccccagccgttccaatgcgccccggtgcgg > 2:340485‑M1/1‑12 (MQ=255) cATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggta < 5:403270‑M1/149‑140 (MQ=255) cATGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggta > 5:200927‑M1/1‑10 (MQ=255) aTGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtac > 6:205679‑M1/1‑9 (MQ=255) aTGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctg < 7:4689‑M1/72‑64 (MQ=255) aTGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctg > 8:4689‑M1/1‑9 (MQ=255) aTGAACCG‑Ccggggctgctgcgcagccctatcgcgacacaacgccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtac > 6:199901‑M1/1‑9 (MQ=255) aCCG‑Ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgc < 2:301008‑M1/149‑145 (MQ=255) | ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCG‑C‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGC > NC_002947/5681271‑5681555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |