New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5807429 =	56 (0.860)	3 (0.050)	3/254	NT	5.6%	coding (2018/2454 nt)	mrcA	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase
	?	NC_002947	5807464 =	47 (0.750)					coding (2053/2454 nt)	mrcA	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase

CCAATCAGCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAAC  >  NC_002947/5807281‑5807569                                                                                                                                                      |                                                                                                                                              ccAATCAGCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGATGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAgcg                                                                                                                                               >  4:324999/1‑149 (MQ=255)   aaTCAGCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGcgcg                                                                                                                                             >  7:156021/1‑149 (MQ=255)   aaTCAGCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGcgcg                                                                                                                                             >  4:355888/1‑149 (MQ=255)     tCAGCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑c                                                                                                                                          <  8:156021/149‑1 (MQ=255)     ccgcagtcccgccatattcgcggcgggcgagggtttccggttggtcgaagccgacccaaacggtagtcacgtaatcggcgttgtaaccggagaaccaggcgtccttggattcgttggtcgtacccgtcttgcccgccaggtcggtGCgg                                                                                                                                            <  1:11892‑M1/4‑1 (MQ=255)     ccgcagtcccgccatattcgcggcggccgagggtttccggttggtcgaagccgacccaaacggtagtcacgtaatcggcgttgtaaccggagaaccaggcgtccttggattcgttggtcgtacccgtcttgcccgccaggtcggtGCgg                                                                                                                                            >  2:231890‑M1/146‑149 (MQ=255)        gCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGTCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CAcc                                                                                                                                       >  6:57709/1‑149 (MQ=255)         cACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCg                                                                                                                                      <  3:165971/149‑1 (MQ=255)              cGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGgccgc                                                                                                                                 >  3:65189/1‑149 (MQ=255)              cGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGgccgc                                                                                                                                 >  3:66874/1‑149 (MQ=255)                 ccATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCgg                                                                                                                              <  1:176162/149‑1 (MQ=255)                  cATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCTAACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCgg                                                                                                                              <  1:105085/149‑1 (MQ=255)                  cATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCggg                                                                                                                             >  6:298183/1‑149 (MQ=255)                         ggCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGc                                                                                                                      <  3:355888/149‑1 (MQ=255)                          gCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGcc                                                                                                                     <  5:298183/149‑1 (MQ=255)                              ggCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTgg                                                                                                                 <  3:185010/149‑1 (MQ=255)                                cACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGc                                                                                                               <  4:65189/149‑1 (MQ=255)                                  ccTTCTGCCTTCAGTCAGATGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCg                                                                                                             <  3:324999/149‑1 (MQ=255)                                   cTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCg                                                                                                             >  5:373364/1‑148 (MQ=255)                                    ttCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCa                                                                                                           >  3:159784/1‑149 (MQ=255)                                     gtttccggttggtcgaagccgacccaaacggtagtcacgtaatcggcgttgtaaccggagaaccaggcgtccttggattcgttggtcgtacccgtcttgcccgccaggtcggtGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCa                                                                                                           >  1:383575‑M1/114‑149 (MQ=255)                                       tGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCAcc                                                                                                         >  4:223228/1‑148 (MQ=255)                                              agtcagGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGAGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGc                                                                                                 <  2:295083/149‑1 (MQ=255)                                                tcagGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCgg                                                                                               <  6:282531/149‑1 (MQ=255)                                                tcagGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCgg                                                                                               <  6:384679/149‑1 (MQ=255)                                                 tcgaagccgacccaaacggtagtcacgtaatcggcgttgtaaccggagaaccaggcgtccttggattcgttggtcgtacccgtcttgcccgccaggtcggtGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCAc                                                                                                          >  6:326940‑M1/102‑138 (MQ=255)                                                 tcgaagccgacccaaacggtagtcacgtaatcggcgttgtaaccggagaaccaggcgtccttggattcgttggtcgtacccgtcttgcccgccaggtcggtGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCAc                                                                                                          <  5:326940‑M1/37‑1 (MQ=255)                                                       gCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACATATAATCGACTGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGAc                                                                                        <  6:373364/149‑1 (MQ=255)                                                         cgcgGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACgg                                                                                      <  3:239351/149‑1 (MQ=255)                                                           cgGCATCGCAAGCGCCGGCAGTGGCCGAACACCTCATCGACGGGCGGACCACCT‑ACATCCTCACCCCCATGCGGCAGGACGTGATCAAGCGCGGCCACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACggg                                                                                     <  1:310390/149‑1 (MQ=255)                                                              cATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCATCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGCGCGATGGCCTTGGGCCGCACCGACCTTGCGGGCAAGAAGGGTAc                                                                                  >  2:212257/1‑148 (MQ=255)                                                               aTCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGa                                                                                <  1:118882/149‑1 (MQ=255)                                                                  gCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGAcc                                                                              >  6:343471/1‑148 (MQ=255)                                                                   cAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCaa                                                                            <  4:66874/149‑1 (MQ=255)                                                                    aaGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAAc                                                                           >  1:389949/1‑149 (MQ=255)                                                                       cgcCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGaa                                                                        <  7:102141/149‑1 (MQ=255)                                                                             cAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACgg                                                                                      >  1:124962/1‑129 (MQ=255)                                                                             cAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACgg                                                                                      <  2:124962/129‑1 (MQ=255)                                                                                           atcatcGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTtctc                                                    <  4:134793/149‑1 (MQ=255)                                                                                           atcatcGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTtctc                                                    >  1:148329/1‑149 (MQ=255)                                                                                            tcatcGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTtctc                                                    <  5:51791/148‑1 (MQ=255)                                                                                              atcGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCgg                                                 <  2:389949/149‑1 (MQ=255)                                                                                                 gACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGc                                                                                                 <  4:219981/98‑1 (MQ=255)                                                                                                 gACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGc                                                                                                 >  3:219981/1‑98 (MQ=255)                                                                                                 gACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTa                                              >  1:149126/1‑149 (MQ=255)                                                                                                     ggCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAAc                                          <  3:223228/149‑1 (MQ=255)                                                                                                               cT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACAAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACg                                >  7:352949/1‑149 (MQ=255)                                                                                                                   cATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGa                             >  8:369857/1‑149 (MQ=255)                                                                                                                   cATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGa                             >  3:109143/1‑149 (MQ=255)                                                                                                                    aTCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGAtt                                   <  2:231749/142‑1 (MQ=255)                                                                                                                    aTCCTCACCAGCATGCTGCAGGACGTGAACAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGAtt                                   >  1:231749/1‑142 (MQ=255)                                                                                                                       cTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTAc                         <  4:109143/149‑1 (MQ=255)                                                                                                                           ccAGCATGCTGCAGGACGTGATCACGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGtt                     <  5:361506/149‑1 (MQ=255)                                                                                                                            cAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGAc                            <  1:338721/141‑1 (MQ=255)                                                                                                                            cAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGAc                            >  2:338721/1‑141 (MQ=255)                                                                                                                            cAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGttt                    <  2:148329/149‑1 (MQ=255)                                                                                                                             aGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTg                   <  5:57709/149‑1 (MQ=255)                                                                                                                             aGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTg                   <  5:343471/149‑1 (MQ=255)                                                                                                                              gCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTgg                  <  1:212257/149‑1 (MQ=255)                                                                                                                                  gctgcAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTAc                                 <  7:119899/130‑1 (MQ=255)                                                                                                                                  gctgcAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTAc                                 >  8:119899/1‑130 (MQ=255)                                                                                                                                   ctgcAGGACGTGATCAAGCGCGG‑CACCGGCAGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCg              <  5:333075/148‑1 (MQ=255)                                                                                                                                          aCGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGAc      >  2:42297/1‑149 (MQ=255)                                                                                                                                          aCGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGAc      <  4:159784/149‑1 (MQ=255)                                                                                                                                              gATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAAc  >  6:399656/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                              CCAATCAGCACTGCGGCCATGCCAGGCGAGGCACCTTCTGCCTTCAGTCAGGTGGCCGCGGCATCGCAAGCGCCGGCAGTGGCCGAACAGATCATCGACGGGCGTACCACCT‑ACATCCTCACCAGCATGCTGCAGGACGTGATCAAGCGCGG‑CACCGGCCGCCGGGCGCTGGCCTTGGGCCGCACCGACCTGGCGGGCAAGACGGGTACGACCAACGAATCCAAGGACGCCTGGTTCTCCGGTTACAACGCCGATTACGTGACTACCGTTTGGGTCGGCTTCGACCAAC  >  NC_002947/5807281‑5807569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.