New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2996268	43 (0.660)	3 (0.050)	3/254	NT	7.2%	coding (576/1017 nt)	PP_2620	hypothetical protein
	?	NC_002947	= 2996321	36 (0.580)					coding (523/1017 nt)	PP_2620	hypothetical protein

CCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTGCGCCAGATACGGTGCAACAGGCTGAGCAGG  >  NC_002947/2996175‑2996466                                                                                                                                                   |                                                                                                                                                  ccTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCa                                                                                                                                                   <  2:406291/147‑1 (MQ=255) ccTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAg                                                                                                                                                  >  2:195044‑M2/1‑147 (MQ=255)  cTGGACGGCGTGACGACTGATCTCGTCTCGAACTTGCGGATGTGCACGTGCTTGATGTCGAAGGAGTGCTCAATGATGCCGGCTACAGTGCACGGCGCTCTGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCATGCGGCTCCAggg                                                                                                                                                >  6:414640‑M2/1‑146 (MQ=255)        ggCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAgcgc                                                                                                                                          >  8:212864/1‑149 (MQ=255)          cGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCg                                                                                                                                        <  1:54886/149‑1 (MQ=255)           gTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCgt                                                                                                                                       <  4:309917/149‑1 (MQ=255)             gacgacTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCgtgt                                                                                                                                     >  1:10688/1‑149 (MQ=255)                 acTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTcccc                                                                                                                                 <  1:7102/149‑1 (MQ=255)                   tGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTc                                                                                                                               >  2:118535/1‑149 (MQ=255)                        gcgTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAAc                                                                                                                          >  7:176502/1‑149 (MQ=255)                         cgTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACt                                                                                                                         >  6:269709/1‑149 (MQ=255)                               gAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGt                                                                                                                   >  8:324523/1‑149 (MQ=255)                                   tCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGt                                                                                                                >  1:204906/1‑148 (MQ=255)                                   tCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGt                                                                                                                >  2:378698/1‑148 (MQ=255)                                     gcgGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGtt                                                                                                               >  2:49799/1‑147 (MQ=255)                                      cgGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAg                                                                                                            <  1:118535/149‑1 (MQ=255)                                       ggATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGc                                                                                                           <  4:227974/149‑1 (MQ=255)                                               aCCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCcagcag                                                                                                   >  7:278923/1‑149 (MQ=255)                                               aCCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCcagcag                                                                                                   <  7:324523/149‑1 (MQ=255)                                                ccTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAgg                                                                                                                                                 <  2:909‑M2/102‑3 (MQ=255)                                                ccTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAgg                                                                                                                                                 >  1:909‑M2/1‑100 (MQ=255)                                                             gAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACt                                                                                     <  1:378698/149‑1 (MQ=255)                                                              aaGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTg                                                                                    >  4:102705/1‑149 (MQ=255)                                                                gCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCg                                                                                  <  2:10688/149‑1 (MQ=255)                                                                      cgcAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTTCGGCTGGCGATCCCGCCGGGAAAACTGAGCAGGCGGCTCCAGGGCATCGCCGTTGCCCCTCGCAACTTCTTGTCGTTAAGCCCCAGCACGGCAAACACGTACTGCGAGAAc                                                                             <  7:111283/148‑1 (MQ=25)                                                                         aaTGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGt                                                                         <  7:212864/149‑1 (MQ=255)                                                                             atgCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACt                                                                     <  2:156191/149‑1 (MQ=255)                                                                                      aCAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACctgg                                                            >  3:59303/1‑149 (MQ=255)                                                                                        aGTGCCCGGCGCTCGGCTGCGGCAGGCGATCACGCCGGCAAAACTGAGCAGGCGTCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCTAGAACCCGTCACTGGCACctggct                                                          <  8:111156/149‑1 (MQ=255)                                                                                          tGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAgggcactgtagccggcatcattgcgcactgcttcgacctcaagcaggtgcacatccgcgagttcgagacgcgatcagtcgtcacgccgtc                                                         <  7:320033‑M2/148‑91 (MQ=255)                                                                                            cccGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAgggcactgtagccggcatcattgcgcactgcttcgacctcaagcaggtgcacatccgcgagttcgagacgcgatcagtcgtcacgccgtccag                                                      <  1:317478‑M2/149‑94 (MQ=255)                                                                                             ccGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAg                                                     >  4:25815/1‑149 (MQ=255)                                                                                              cGGAGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGc                                                    >  3:233416/1‑149 (MQ=255)                                                                                                   cTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATg                                               <  8:221835/149‑1 (MQ=255)                                                                                                    tCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCgg                                                  >  6:109657/1‑145 (MQ=255)                                                                                                    tCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCgg                                                  <  5:109657/145‑1 (MQ=255)                                                                                                    tCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATg                                               >  7:58476/1‑148 (MQ=255)                                                                                                            ggctgGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCgg                                      >  7:42062/1‑149 (MQ=255)                                                                                                            ggctgGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCgg                                      <  2:204906/149‑1 (MQ=255)                                                                                                              ctgGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTa                                    <  6:22917/149‑1 (MQ=255)                                                                                                                 gCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACt                                  <  5:269709/148‑1 (MQ=255)                                                                                                                  cGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAgggcactgtagccggcatcattgcgcactgcttcgacctcaagcaggtgcacatccgcgagttcgagacgcgatcagtcgtcacgccgtccaggcagcttgcaagcctggggcgg                                >  2:317478‑M2/1‑34 (MQ=255)                                                                                                                   gATCACGCCGGCAAAACTGAGCAGGCGGCTCCACGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGACCCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTgc                               >  7:293036/1‑149 (MQ=255)                                                                                                                       aagCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTgcgc                             >  7:352247/3‑147 (MQ=255)                                                                                                                        cGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTGCGCCAg                          <  8:42062/149‑1 (MQ=255)                                                                                                                                               cTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTGCGCCAGATACGGTGCAACAGGCTGAGCAg   <  2:310393/149‑1 (MQ=255)                                                                                                                                                tCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTGCGCCAGATACGGTGCAACAGGCTGAGCAgg  >  6:117526/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                  CCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAGCGCCGTGTCCCCTCGCAACTGCTTGTCGTTAAGCCCCAGCAGGGCAAACACGTACTGCGAGAACCCGTCACTGGCACCTGGCTGGAAGCGGATGTAATAGCGGTACTTGCGCCAGATACGGTGCAACAGGCTGAGCAGG  >  NC_002947/2996175‑2996466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.