| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4626524 = | NA (NA) | 10 (0.150) | 4/264 | NT | NA | coding (980/1533 nt) | PP_4091 | transposase |
| ? | NC_002947 | 4626581 = | NA (NA) | coding (923/1533 nt) | PP_4091 | transposase | |||||
ATACAGTTTGTTGATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAACA > NC_002947/4626433‑4626671 | aTACAGTTTGTTGATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAAc > 1:4599/1‑149 (MQ=34) tACAGTTTGTTGATCATCGTCAGCGCAAGCATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAAc > 1:230198/1‑149 (MQ=21) tACAGTTTGTTGATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAAcc < 2:140817/149‑1 (MQ=34) tttGTTGATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGCTACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCg > 1:110980/1‑149 (MQ=21) ttgttgATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGt < 8:55942/148‑1 (MQ=34) tgttgATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTa > 6:377083/1‑148 (MQ=34) gATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAatcat > 2:196141/1‑149 (MQ=34) gATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAatcat > 7:168330/1‑149 (MQ=34) atcatcGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAatcat < 4:309194/148‑1 (MQ=34) tcatcGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCg < 5:377083/149‑1 (MQ=34) tcatcGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCg < 8:343435/149‑1 (MQ=34) catcGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCTGTCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCg > 1:319906/1‑149 (MQ=21) catcGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCgg > 3:105550/1‑149 (MQ=34) atcGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGt < 7:381052/149‑1 (MQ=34) aTCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCGACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACcgc > 7:283863/1‑149 (MQ=21) ggCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGa < 6:157187/148‑1 (MQ=34) gcgcGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATa < 6:238201/149‑1 (MQ=34) cgcgACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAg < 3:266456/149‑1 (MQ=34) cgcgACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAg < 4:105550/149‑1 (MQ=34) cgACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGcc < 8:168330/149‑1 (MQ=34) cGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTcc < 2:230198/149‑1 (MQ=34) ttGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCcagcag > 7:13756/1‑149 (MQ=32) gCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCcagcag < 3:218907/147‑1 (MQ=32) gCCCTTAGGCTGC‑ACCTTCTGCGCT‑ACGACGAATTTACGCCGATCATGCGCCATGCACGCCAGTCTTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTACCCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCCGgc > 4:106393/1‑149 (MQ=11) cccTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACTTAACCTCGATAGCCCTCCAGCAGgcg > 6:312902/1‑149 (MQ=17) ccTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcg > 8:103304/1‑148 (MQ=32) ccTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcg > 5:11681/1‑148 (MQ=32) ttAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAg > 4:253053/1‑149 (MQ=32) aGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGc < 3:378390/148‑1 (MQ=32) cT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAat > 5:339616/1‑87 (MQ=33) cT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAat < 6:339616/87‑1 (MQ=33) cgacgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtg > 8:246241/1‑149 (MQ=32) gacgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtgg > 4:298451/1‑149 (MQ=32) acgaATTTACGCCGAACATGCGCCATGCTCGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggt > 1:23447/1‑149 (MQ=17) cgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtg < 2:319906/149‑1 (MQ=32) cgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtg < 5:290268/149‑1 (MQ=32) cgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtg < 5:327151/149‑1 (MQ=32) cgaATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtg < 2:4599/149‑1 (MQ=32) aaTTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTggtggt < 3:305813/149‑1 (MQ=32) aCGCCGAACATGTGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCgg > 6:126338/1‑136 (MQ=17) aCGCCGAACATGTGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCgg < 5:126338/136‑1 (MQ=17) aCGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTaa < 7:246241/148‑1 (MQ=32) cGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTCGCGCCAACGCGTGTTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGaa < 5:415008/149‑1 (MQ=12) cGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGaa > 3:368056/1‑149 (MQ=32) cGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGaa > 2:339348/1‑149 (MQ=32) gAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAAc < 6:11681/149‑1 (MQ=31) gAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAAc < 1:196141/149‑1 (MQ=31) aaCATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAACa < 2:169048/149‑1 (MQ=11) | ATACAGTTTGTTGATCATCGTCAGCGCAA‑CATCGGCGCGACCGGTCTTGCCCTTAGGCTGC‑ACCTTCTGCGCT‑TCGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAACA > NC_002947/4626433‑4626671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |