Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2038174	2038379	206	25 [24]	[24] 25	[rffE]	[rffE]

GCGGAAGGGGGGCTGCTGGCCAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCA  >  NC_002947/2038259‑2038527                                                                                                                          |                                                                                                                                                    gcgGAAGGGGGGCTGCTGGCCAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGGTTTGCGTATGGGCGCGAAGGGTTTGCCATCg                                                                                                                           >  7:275052/1‑148 (MQ=255)                    ccAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGGTTTTCCATGGCCATAGGGGTTATGGGCg                                                                                                         >  3:148826/1‑147 (MQ=255)                               tGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTcgc                                                                                            >  3:249211/1‑149 (MQ=255)                                      cggcggGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATAcgc                                                                                     >  4:182518/1‑149 (MQ=255)                                                          tATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGGTTTGCGAATGCGCGCCCAGGGTTTGCCATCGCCATTGGGGTTATGGGCGAAGCTCATTTCGCGAAAAGCCGCCTCAATGGGAAGCAAg                                                                  >  2:120786/1‑148 (MQ=255)                                                          tATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCg                                                                           >  3:131855/1‑139 (MQ=255)                                                               gcgGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCCGGTGGCCAGGGGTTTGCGATTGCGCCGGCAGGCTTTGCCAGCGCCATAGGGGTTTTGGGCGAAGCTCATTTGGCGATACCCCGCCGCATCGGGCAGCAAGGTAcg                                                             >  2:269874/1‑147 (MQ=255)                                                               gcgGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAg                                                                  >  3:29904/1‑143 (MQ=255)                                                               gcgGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGATTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCGGCCTCATCGGTCTGTAAGGTACt                                                             >  6:44531/1‑148 (MQ=255)                                                                    tGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGc                                                       >  2:27818/1‑149 (MQ=255)                                                                    tGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGc                                                       >  4:197073/1‑149 (MQ=255)                                                                        cccGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGATGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGc                                                   >  7:299551/1‑149 (MQ=255)                                                                         ccGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAgg                                                                 >  1:328183/1‑134 (MQ=255)                                                                         ccGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCCCGCAGGCTTTGCCATCCCCATAGGGGTTATGGGCGAAGCACATTTCGCCATACGCCGCCTCAACGGTCAGCAAGGTACACAACGCCCGca                                                  >  1:169414/1‑149 (MQ=255)                                                                               cTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGCGTTTGCGTATGCCCCCCCAGGCTTTCCCATCGCCATAGGGGTTTTGGGCGAACGTCATTTCGCGATACGCCGCCTCAAGGGTCAGCAAGGTAATCAACGCCCGCACaaac                                             >  6:326063/1‑146 (MQ=255)                                                                                    ttGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCGTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGTTGc                                        >  8:315230/1‑148 (MQ=255)                                                                                            tGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGt                               >  4:401853/1‑149 (MQ=255)                                                                                             ggggggggggCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTg                              >  5:9000/1‑149 (MQ=255)                                                                                                gggggggCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATc                                             <  7:158685/131‑1 (MQ=255)                                                                                                gggggggCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATc                                             >  8:158685/1‑131 (MQ=255)                                                                                                                cAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGa                 <  4:2897/143‑1 (MQ=255)                                                                                                                cAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGa                 >  3:2897/1‑143 (MQ=255)                                                                                                                cAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTAc           >  2:395729/1‑149 (MQ=255)                                                                                                                   ggCTTTGCGTATGCGCGCGGAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTAcc          <  5:326063/147‑1 (MQ=255)                                                                                                                          cGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCa  <  1:269874/148‑1 (MQ=255)                                                                                                                          |                                                                                                                                                    GCGGAAGGGGGGCTGCTGGCCAGTTTTTACTGGGGGGCGGCGGGGCTGCGGATATCGTATTCGCGGGTGAACCCGCACCTACATTGAGCGGTGGGGGGGGGGCCAGGTGGCCAGGGCTTTGCGTATGCGCGCGCAGGCTTTGCCATCGCCATAGGGGTTATGGGCGAAGCTCATTTCGCGATACGCCGCCTCATCGGTCAGCAAGGTACTCAACGCCCGCACAATCGATGCTACTTCGGTGCCCACCAGCTTGACCGTACCTGCCGCCA  >  NC_002947/2038259‑2038527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑