Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	54,899	T→C	6.6%	*225Q (TAG→CAG)	czcR‑II →	response regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	54,899	0	T	C	6.6%	172.2 / 2.5	60	*225Q (TAG→CAG)	czcR‑II	response regulator
Reads supporting (aligned to +/- strand):  ref base T (27/29);  new base C (2/2);  total (29/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

ATTTCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGTATAGCATTGATTATCAGC  >  NC_002947/54752‑55043                                                                                                                                                     |                                                                                                                                                 attTCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGAt                                                                                                                                                  <  6:167980/148‑1 (MQ=255)  tttCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATa                                                                                                                                                 <  4:369182/148‑1 (MQ=255)  tttCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATa                                                                                                                                                 <  1:239248/148‑1 (MQ=255)    tCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGtt                                                                                                                                              >  4:178468/1‑149 (MQ=255)             tGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGct                                                                                                                                      <  6:218716/148‑1 (MQ=255)                     gAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTAc                                                                                                                             >  7:219162/1‑149 (MQ=255)                     gAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGACAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTAc                                                                                                                             >  6:63203/1‑149 (MQ=255)                       aTTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCg                                                                                                                           <  4:38361/149‑1 (MQ=255)                              cTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATcc                                                                                                                    <  8:219162/149‑1 (MQ=255)                               tGCGACACAAACGTTGTAGAGGTGTCGAGTTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATcc                                                                                                                    >  1:230371/1‑149 (MQ=255)                                       aaaCGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGc                                                                                                           >  7:91238/1‑149 (MQ=255)                                       aaaCGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGc                                                                                                           >  7:204205/1‑149 (MQ=255)                                                 gaggagTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGc                                                                                                  <  8:344965/148‑1 (MQ=255)                                                 ccggTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGACACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGc                                                                                                  <  8:304510/146‑1 (MQ=255)                                                  agGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCtt                                                                                                >  6:363674/1‑149 (MQ=255)                                                  agGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCtt                                                                                                <  5:287436/149‑1 (MQ=255)                                                    gtgtCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGc                                                                                              >  3:146078/1‑149 (MQ=255)                                                          a‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACtt                                                                                        <  1:21354/149‑1 (MQ=255)                                                               gAAGACTCAGAGCCAAGATAGATGACGCTTTCGAGAACAAACTGATACATAAGCTTCGGGGCGTATGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAACATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAgg                                                                                    >  8:170607/1‑149 (MQ=255)                                                               gAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAgg                                                                                    >  8:132104/1‑149 (MQ=255)                                                               gAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAgg                                                                                    >  4:396019/1‑149 (MQ=255)                                                               gAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAg                                                                                     <  2:6110/148‑1 (MQ=255)                                                                aaGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGt                                                                                   >  4:342225/1‑149 (MQ=255)                                                                    cTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCt                                                                               <  8:204205/149‑1 (MQ=255)                                                                     tCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTg                                                                              >  5:199599/1‑149 (MQ=255)                                                                     tCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACCCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAAACCGCTACATGCTCCCGACGCTTGCGAAGTTCAGGTTTCTg                                                                              >  4:222909/1‑149 (MQ=255)                                                                        gagCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGttt                                                                           <  2:163878/149‑1 (MQ=255)                                                                         agCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTa                                                                          <  2:230371/149‑1 (MQ=255)                                                                                 tagatGACCCTTTCGAGACCTATCTGATACATACGATTCGGGGTGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCcgc                                                                  <  3:222909/149‑1 (MQ=255)                                                                                  agatGACCCTTTCGAGACCAAACTGATACATACGCTTAGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTACCGTCGCTTGCGAACTTCAGGTTTCTGTTTACTATcag                                                                   >  2:79645/1‑145 (MQ=255)                                                                                   gatGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCgcgg                                                                >  6:329473/1‑149 (MQ=255)                                                                                    atGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAg                                                                                     <  6:267336/127‑1 (MQ=255)                                                                                    atGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAg                                                                                     >  5:267336/1‑127 (MQ=255)                                                                                    atGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCgcggc                                                               >  2:26262/1‑149 (MQ=255)                                                                                     tGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCgcggcg                                                              <  3:342225/149‑1 (MQ=255)                                                                                       aCCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCt                                                            >  5:190761/1‑149 (MQ=255)                                                                                              cGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGa                                                          >  5:59515/1‑144 (MQ=255)                                                                                              cGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGa                                                          <  6:59515/144‑1 (MQ=255)                                                                                               gagaCCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTa                                                                          >  1:346120/1‑127 (MQ=255)                                                                                               gagaCCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTa                                                                          <  2:346120/127‑1 (MQ=255)                                                                                               gagaCCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCct                                                     <  1:26262/148‑1 (MQ=255)                                                                                                agaCCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCctca                                                   >  1:101/1‑149 (MQ=255)                                                                                                 gaCCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCctcac                                                  <  5:63203/149‑1 (MQ=255)                                                                                                  aCCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCctcact                                                 <  4:146078/149‑1 (MQ=255)                                                                                                      aaCTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTcaac                                             <  3:178468/149‑1 (MQ=255)                                                                                                       aCTGATACATACGCTTCGGGGCGTAGGGTCTGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTcaaca                                            <  5:363674/149‑1 (MQ=255)                                                                                                             acatacGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAg                                      >  8:302670/1‑149 (MQ=255)                                                                                                              catacGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAgg                                     <  3:396019/149‑1 (MQ=255)                                                                                                               atacGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCctca                                                   <  4:319887/134‑1 (MQ=255)                                                                                                               atacGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCctca                                                   >  3:319887/1‑134 (MQ=255)                                                                                                                tacGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGACAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAgg                                     >  4:142938/1‑147 (MQ=255)                                                                                                                tacGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGACAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAgg                                     >  4:136958/1‑147 (MQ=255)                                                                                                                                  gTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGta                   >  4:322930/1‑147 (MQ=255)                                                                                                                                     tgtgCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGTATAGc               <  8:91238/148‑1 (MQ=255)                                                                                                                                          ttGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAg                      >  4:397050/1‑136 (MQ=255)                                                                                                                                          ttGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAg                      <  3:397050/136‑1 (MQ=255)                                                                                                                                           tGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCAAACTTGAGGTTTCTGTTTACGATCcgcg                                                                 >  7:296462/1‑92 (MQ=255)                                                                                                                                           tGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCAAACTTGAGGTTTCTGTTTACGATCcgcg                                                                 <  8:296462/92‑1 (MQ=255)                                                                                                                                              aaaaCGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGTATAGCATTGATTATc     <  7:302670/149‑1 (MQ=255)                                                                                                                                                 aCGACAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGTATAGCATTGATTATcagc  <  3:136958/149‑1 (MQ=255)                                                                                                                                                 aCGACAGTTGCCAAGCTCTATAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGTATAGCATTGATTATcagc  <  3:142938/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 ATTTCGCAGGTTTGGGATATGAATTTTGACTGCGACACAAACGTTGTAGAGGTGTCGA‑TTCGAAGACTCAGAGCCAAGATAGATGACCCTTTCGAGACCAAACTGATACATACGCTTCGGGGCGTAGGGTATGTGCTTGAAAAACGATAGTTGCCAAGCTCTCTAGTACCGAAAATCCGCTACATGCTCCCGTCGCTTGCGAACTTGAGGTTTCTGTTTACGATCCGCGGCGCTGATTCCTCACTCAACAAATGAGGTAGGCTGTACATGAGGTATAGCATTGATTATCAGC  >  NC_002947/54752‑55043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑