Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,080,866 G→T 5.9% intergenic (‑90/+73) amaC ← / ← dpkA D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,080,8660GT 5.9% 219.5 / 3.1 68intergenic (‑90/+73)amaC/dpkAD‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
Reads supporting (aligned to +/- strand):  ref base G (32/32);  new base T (2/2);  total (34/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01

GTTTCCATCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGCCACCTCGC  >  NC_002947/4080721‑4081012
                                                                                                                                                 |                                                                                                                                                  
ttttCCATCAACGAGAGTATCGGGTCGCCGGCATAGGCATCGAAAGGTTTGAACACAGCGTGCAGCTCCTTTGATCAGGACGGTACGGAAAGTCAGTGTTGAGTATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGtt                                                                                                                                                 <  1:294478/148‑1 (MQ=255)
   tCCATCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGCACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGt                                                                                                                                               <  7:94618/148‑1 (MQ=255)
   tCCATCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGt                                                                                                                                               <  8:20356/148‑1 (MQ=255)
     cATCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAATGTTgca                                                                                                                                              >  8:105121/1‑145 (MQ=255)
     cATCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGGCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAATGTTgca                                                                                                                                              >  8:99381/1‑145 (MQ=255)
      aTCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGGACGGAAAGTCAGTGTTGCGCATACCCGGAGGGCGGGTTCAGGAACCTCCACTATTGTGCAAGGTTGTCtct                                                                                                                                           >  6:47146/1‑147 (MQ=255)
          aCGAGAGGATCGGGTCGCGGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCaa                                                                                                                                       <  8:183594/149‑1 (MQ=255)
            gagaGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACa                                                                                                                                     >  1:394413/1‑149 (MQ=255)
                 gATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCa                                                                                                                                >  3:2661/1‑149 (MQ=255)
                 gATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCa                                                                                                                                <  5:47146/149‑1 (MQ=255)
                        tCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAATGTTGCATAGACAACCTTGCacaatagt                                                                                                                         <  7:99381/149‑8 (MQ=255)
                        tCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAATGTTGCATAGACAACCTTGCacaatagt                                                                                                                         <  7:105121/149‑8 (MQ=255)
                        tCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCgg                                                                                                                         <  1:259726/149‑1 (MQ=255)
                                  aGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGggct                                                                                                               >  3:25213/1‑149 (MQ=255)
                                   ggCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGAGCAGGACGGTACGGAAAGGCAGTGTTGAGCATACCAGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGggctg                                                                                                              <  2:146683/149‑1 (MQ=255)
                                     cATCGACATGTTTGAACAAAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTTAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGTATGAGggctggc                                                                                                            <  3:334380/149‑1 (MQ=255)
                                             tGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTACATGACCGGGATGAGGCTGGCTTTTTcgcg                                                                                                   <  3:156216/149‑1 (MQ=255)
                                               tttGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCgg                                                                                                  >  1:281747/1‑149 (MQ=255)
                                                     cacaGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGc                                                                                                                                         >  4:306085/1‑104 (MQ=255)
                                                     cacaGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGc                                                                                                                                         <  3:306085/104‑1 (MQ=255)
                                                     cacaGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAAc                                                                                            >  1:167390/1‑149 (MQ=255)
                                                      acaGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCt                                                                                                                                             >  4:360413/1‑99 (MQ=255)
                                                      acaGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCt                                                                                                                                             <  3:360413/99‑1 (MQ=255)
                                                            tGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGaa                                                                                     <  1:169158/149‑1 (MQ=255)
                                                              cAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAg                                                                                    <  8:27077/148‑1 (MQ=255)
                                                               aGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTTTACCCGCGaaaaa                                                                                  <  4:2661/149‑4 (MQ=255)
                                                               aGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAggg                                                                                  >  1:365741/1‑149 (MQ=255)
                                                               aGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAggg                                                                                  >  2:184275/1‑149 (MQ=255)
                                                               aGCTCCTTGCATCAGGACTGAACGGATAGTCAGTGTTGAGCATAGCGGGAGTGCGTGTTCAGGAAGATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAggg                                                                                  <  6:131397/149‑1 (MQ=255)
                                                                 cTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGc                                                                                >  8:27853/1‑149 (MQ=255)
                                                                         aTCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAg                                                                        <  2:167390/149‑1 (MQ=255)
                                                                            aGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGcc                                                                      >  5:74448/1‑148 (MQ=255)
                                                                            aGGACGGGACGGTAAGGCAGTCTTGAGCATTCCCGGAGTGCTGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGcc                                                                      <  8:297581/148‑1 (MQ=255)
                                                                                cGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAagca                                                                 <  1:184275/149‑1 (MQ=255)
                                                                                   tACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGct                                                              >  5:23873/1‑149 (MQ=255)
                                                                                          aGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAg                                                       <  4:25213/149‑1 (MQ=255)
                                                                                            tCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCa                                                                         <  6:323154/129‑1 (MQ=255)
                                                                                            tCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCa                                                                         >  5:323154/1‑129 (MQ=255)
                                                                                                tgtTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTCTTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCttt                                                 <  4:92382/149‑1 (MQ=255)
                                                                                                  ttGAGCATACCCGGCGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTc                                                <  6:23873/148‑1 (MQ=255)
                                                                                                    gAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTc                                                >  8:74331/1‑146 (MQ=255)
                                                                                                    gAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCaa                                              <  2:394413/148‑1 (MQ=255)
                                                                                                    gAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAAc                                             >  2:267441/1‑149 (MQ=255)
                                                                                                     aGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACt                                            >  5:412817/1‑149 (MQ=255)
                                                                                                          aCCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGc                                       >  7:195500/1‑149 (MQ=255)
                                                                                                            ccGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCACGCAGCTCTTTCAGGCCTTTCAACTCCTGCTc                                     >  2:268/1‑149 (MQ=255)
                                                                                                             cGGATTGCGGGTTCAGGAAAATACACTATTTTGCAAGTTTGTATATGCAACATTGCATGACCTGGATGAGGGCTGGCTTTTTCGCGTGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCg                                    <  1:192561/149‑1 (MQ=255)
                                                                                                             cGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCg                                    >  4:105275/1‑149 (MQ=255)
                                                                                                             cGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCg                                    <  6:74448/149‑1 (MQ=255)
                                                                                                                       gTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCgg                                   <  5:298107/140‑1 (MQ=255)
                                                                                                                       gTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCgg                                   >  6:298107/1‑140 (MQ=255)
                                                                                                                       gTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGcc                           <  4:373222/148‑1 (MQ=255)
                                                                                                                       gTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGcc                           >  3:373222/1‑148 (MQ=255)
                                                                                                                       gTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCa                          >  8:105045/1‑149 (MQ=255)
                                                                                                                       gTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCa                          >  3:83308/1‑149 (MQ=255)
                                                                                                                           aGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCAcccc                      <  2:131713/149‑1 (MQ=255)
                                                                                                                           aGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCAcccc                      >  2:95064/1‑149 (MQ=255)
                                                                                                                               aCATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACACGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTAAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCcctcc                  >  1:46777/1‑149 (MQ=255)
                                                                                                                                   ccACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCa                                                        <  3:11207/107‑1 (MQ=255)
                                                                                                                                   ccACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCa                                                        >  4:11207/1‑107 (MQ=255)
                                                                                                                                    cACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCctcctcctc             <  1:267441/149‑1 (MQ=255)
                                                                                                                                     aCTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCg                                    <  3:74653/125‑1 (MQ=255)
                                                                                                                                     aCTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCg                                    >  4:74653/1‑125 (MQ=255)
                                                                                                                                       tATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGc          >  6:1416/1‑149 (MQ=255)
                                                                                                                                            tgCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGCCAcc      <  2:281747/148‑1 (MQ=255)
                                                                                                                                            tgCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGCCACCt     >  8:18271/1‑149 (MQ=255)
                                                                                                                                              cAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGCCACCTcg   >  3:342770/1‑149 (MQ=255)
                                                                                                                                               aaGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGCCACCTcgc  >  1:359169/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GTTTCCATCAACGAGAGGATCGGGTCGCCGGCATAGGCATCGACATGTTTGAACACAGCGTGCAGCTCCTTGGATCAGGACGGTACGGAAAGTCAGTGTTGAGCATACCCGGAGTGCGGGTTCAGGAACATCCACTATTGTGCAAGGTTGTCTATGCAACATTGCATGACCGGGATGAGGGCTGGCTTTTTCGCGGGTAAACCCGCGAAGGGGCCAAATCAGCCAAGCAGCTCTTTCAGGCCTTTCAACTCCTGCTCGGTCACCGCCACCCCCTCCTCCTCGGCCACCTCGC  >  NC_002947/4080721‑4081012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: