| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,163,505 | C→A | 9.0% | intergenic (‑44/‑138) | pssA ← / → PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,163,505 | 0 | C | A | 9.0% | 197.4 / 9.5 | 67 | intergenic (‑44/‑138) | pssA/PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (32/29); new base A (3/3); total (35/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.17e-01 | |||||||||||
CAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGT > NC_002947/4163363‑4163647 | caggcaggCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCggg < 3:393820/149‑1 (MQ=255) aggcaggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCCGCCGGCAGGCaggg < 2:43284/149‑1 (MQ=255) gcaggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCcggcg > 1:39751/1‑144 (MQ=255) gcaggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCcggcg < 2:39751/144‑1 (MQ=255) aggcGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCAt > 8:73793/1‑149 (MQ=255) cgGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTg < 3:122474/149‑1 (MQ=255) gTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGc > 7:294663/1‑149 (MQ=255) cATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCg < 7:135342/149‑1 (MQ=255) aTCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCgg < 2:31265/149‑1 (MQ=255) ggCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGgtg > 6:50654/1‑149 (MQ=255) caCCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGa > 5:238922/1‑149 (MQ=255) aCCTGGAGCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGAt < 6:268555/149‑1 (MQ=255) gATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGAcc < 3:376263/149‑1 (MQ=255) gATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGAc < 2:14894/148‑1 (MQ=255) ccATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCAt < 5:50654/149‑1 (MQ=255) cATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCAt > 5:182063/1‑148 (MQ=255) ggCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATaac > 8:113777/1‑148 (MQ=255) tAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAAcaacaa < 7:113777/149‑1 (MQ=255) tGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCg > 2:14209/1‑124 (MQ=255) tGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCg < 1:14209/124‑1 (MQ=255) tGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAAcc > 5:181397/1‑149 (MQ=255) aaGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCa > 5:210277/1‑131 (MQ=255) aaGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCa < 6:210277/131‑1 (MQ=255) aaGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCAcgc < 6:182063/149‑1 (MQ=255) cGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGc > 7:102989/1‑149 (MQ=255) gTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCttt < 1:16896/139‑1 (MQ=255) gTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCttt > 2:16896/1‑139 (MQ=255) cACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCt < 7:73793/148‑1 (MQ=255) aCTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGa < 6:181397/149‑1 (MQ=255) aCTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGa < 1:70777/149‑1 (MQ=255) cGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGaccaac < 6:238922/149‑1 (MQ=255) gCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGaccaac > 6:373854/1‑148 (MQ=255) gCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATACGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGaccaac > 6:198082/1‑148 (MQ=255) aCCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCAc < 1:25442/110‑1 (MQ=255) aCCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCAc > 2:25442/1‑110 (MQ=255) aCCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAg < 1:403037/147‑1 (MQ=255) aCCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAg > 2:403037/1‑147 (MQ=255) aCCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGc > 6:85539/1‑149 (MQ=255) cTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGctc > 6:382038/1‑117 (MQ=255) cTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGctc < 5:382038/117‑1 (MQ=255) cTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCt < 5:373854/149‑1 (MQ=255) ctctGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAg > 2:150142/1‑149 (MQ=255) ctctGTGCAATCACTGTAGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGAATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCa < 8:294663/148‑1 (MQ=255) tgtgCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCtt > 5:351972/1‑149 (MQ=255) tgtgCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCtt > 5:358312/1‑149 (MQ=255) tgtgCAATCACTGTCGGCCCTGCCTGCCGGCCGGGCCATTCCTGGCCGATGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCtt > 6:184510/1‑149 (MQ=255) tgCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGc < 4:242711/112‑1 (MQ=255) tgCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGc > 3:242711/1‑112 (MQ=255) cAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGcccc > 6:128407/1‑124 (MQ=255) cAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGcccc < 5:128407/124‑1 (MQ=255) cAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGca < 4:387410/148‑1 (MQ=255) aaTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAACGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAg < 1:83783/135‑1 (MQ=255) aaTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAg > 2:83783/1‑134 (MQ=255) aaTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGca > 3:106932/1‑147 (MQ=255) aTCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAg > 3:90550/1‑149 (MQ=255) aCTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGaa < 8:102989/149‑1 (MQ=255) cTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCCACCAGGCCTCAGCTTGCACAGGaa > 5:256344/1‑148 (MQ=255) tGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGaa > 5:219624/1‑147 (MQ=255) gaatggCCCCGCCGGCAGGCAGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCtt < 1:204415/134‑1 (MQ=255) gaatggCCCCGCCGGCAGGCAGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCtt > 2:204415/5‑138 (MQ=255) tCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAgg < 5:103789/143‑1 (MQ=255) tCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAgg > 6:103789/1‑143 (MQ=255) ggCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATCACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAgcg > 5:213354/1‑148 (MQ=255) gCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAgcgc > 8:313044/1‑148 (MQ=255) ccccGCCGGCAGGCAGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTg < 3:69366/133‑1 (MQ=255) ccccGCCGGCAGGCAGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTg > 4:69366/1‑133 (MQ=255) ccccGCCGGCAGGCAGGGCCATTCCTGGACGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTAACTGAACCTGACAAACCAGGCCTAAGCTTGCACAGGAACAGCGCa > 4:136135/1‑148 (MQ=255) cccTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCaa < 7:313044/149‑1 (MQ=255) ctgcctgcCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATg > 6:49555/1‑149 (MQ=255) gcctgccGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGt > 8:275342/1‑149 (MQ=255) | CAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCAGCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTATGATCGACCCGGCAACGACCCATAACAACAA‑GAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCAATGGT > NC_002947/4163363‑4163647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |