Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,385,288 A→C 7.4% V83G (GTT→GGT)  PP_3860 ← FluMu protein gp47

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,385,2880AC 7.4% 200.5 / 5.2 65V83G (GTT→GGT) PP_3860FluMu protein gp47
Reads supporting (aligned to +/- strand):  ref base A (31/29);  new base C (3/2);  total (34/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCGCACCGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCCGCGAAGCCAC  >  NC_002947/4385143‑4385436
                                                                                                                                                 |                                                                                                                                                    
gcgcACCGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAg                                                                                                                                                   >  1:389239/1‑149 (MQ=255)
gcgcACCGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAg                                                                                                                                                   >  8:346663/1‑149 (MQ=255)
  gcACCGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACGATACCGGCATCCCCCAAGGCGGTATTAGCGCCGCGGACGACAATGGGGCCTGCGGCGGGACCAgcc                                                                                                                                                 >  2:156644/1‑149 (MQ=255)
   cACCGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAgccg                                                                                                                                                <  4:398079/149‑1 (MQ=255)
      cGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGTTCCAgccgcag                                                                                                                                             <  8:219096/149‑3 (MQ=255)
        gCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACTGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGTTCCAgccgcaggc                                                                                                                                           <  5:359004/149‑5 (MQ=255)
               cgcCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCCGCGGCTGGAACAGCCGCCTTGCGccc                                                                                                                                      <  1:217314/147‑1 (MQ=255)
                gcCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTc                                                                                                                                   >  3:380643/1‑149 (MQ=255)
                      ccATCCACCAGTCGCGTCGTTACGGTCACGACGTAGCGGCTGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTaa                                                                                                                              <  3:87029/148‑1 (MQ=255)
                             ccaGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCAt                                                                                                                      >  4:324252/1‑149 (MQ=255)
                                gACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACa                                                                                                                                                    <  8:329457/116‑1 (MQ=255)
                                gACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACa                                                                                                                                                    >  7:329457/1‑116 (MQ=255)
                                 aCGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCgg                                                                                                                  <  6:168779/149‑1 (MQ=255)
                                  cgcgTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGc                                                                                                                 <  1:115045/149‑1 (MQ=255)
                                        gtTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCAttt                                                                                                           <  2:195853/149‑1 (MQ=255)
                                         ttACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCAttt                                                                                                           >  4:204934/1‑148 (MQ=255)
                                           aCGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGTTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGACCTTAAGGCGCCATTCGGCCCATTTca                                                                                                         <  8:282913/148‑1 (MQ=255)
                                                cACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAgcagca                                                                                                   >  1:297501/1‑149 (MQ=255)
                                                 acgacgTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAgcagca                                                                                                   >  8:386963/1‑148 (MQ=255)
                                                   gacgTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGCGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTcagc                                                                                                       >  6:286746/1‑142 (MQ=255)
                                                   gacgTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGAGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTcagc                                                                                                       <  5:286746/142‑1 (MQ=255)
                                                    acgTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCAtctc                                                                                               <  1:296347/149‑1 (MQ=255)
                                                           ggcggcCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATctct                                                                                              <  5:393487/143‑1 (MQ=255)
                                                           ggcggcCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATctct                                                                                              >  6:393487/1‑143 (MQ=255)
                                                              ggcCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCTTCTCTTCATCGCAg                                                                                     <  7:346663/149‑1 (MQ=255)
                                                                     cTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCg                                                                              <  1:156644/149‑1 (MQ=255)
                                                                         tGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTg                                                                          >  4:150883/1‑149 (MQ=255)
                                                                           cTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTgg                                                                         <  4:185706/148‑1 (MQ=255)
                                                                              gTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCa                                                                                           >  6:256516/1‑127 (MQ=255)
                                                                              gTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCa                                                                                           <  5:256516/127‑1 (MQ=255)
                                                                              gTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGa                                                                       <  3:324252/147‑1 (MQ=255)
                                                                                   ccATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTggg                                                                        <  4:284088/141‑1 (MQ=255)
                                                                                   ccATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTggg                                                                        >  3:284088/1‑141 (MQ=255)
                                                                                   ccATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCcgc                                                                <  2:297501/149‑1 (MQ=255)
                                                                                    cATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCcgcg                                                               <  2:389239/149‑1 (MQ=255)
                                                                                         cGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCa                                                                                           <  1:400972/116‑1 (MQ=255)
                                                                                         cGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCa                                                                                           >  2:400972/1‑116 (MQ=255)
                                                                                         cGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGc                                                                                >  6:238488/1‑127 (MQ=255)
                                                                                         cGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGc                                                                                <  5:238488/127‑1 (MQ=255)
                                                                                              tCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTc                                                     <  4:380643/149‑1 (MQ=255)
                                                                                               ccaccaAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATAGCAGCTCGCCGGGTGGGACTGCCGCGCGATCCACtac                                                    >  8:223532/1‑147 (MQ=255)
                                                                                                 accaAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCt                                                   >  1:145543/1‑148 (MQ=255)
                                                                                                    aaGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTc                                                     <  3:297831/143‑1 (MQ=255)
                                                                                                    aaGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTc                                                     >  4:297831/1‑143 (MQ=255)
                                                                                                    aaGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATg                                               >  3:332479/1‑149 (MQ=255)
                                                                                                         gTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTgg                                                                         >  5:387821/1‑118 (MQ=255)
                                                                                                         gTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTgg                                                                         <  6:387821/118‑1 (MQ=255)
                                                                                                          ttattaGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTGCTGATGGCCATa                                         >  4:277870/1‑149 (MQ=255)
                                                                                                          ttattaGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATa                                         >  5:226405/1‑149 (MQ=255)
                                                                                                           tattaGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATa                                         <  6:226405/148‑1 (MQ=255)
                                                                                                                gcgcCGCTGACGACAATGGGGCCTGCGGCTGGGACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGAcc                                   >  1:404710/1‑149 (MQ=255)
                                                                                                                  gccgcTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATAc                                        <  7:21607/142‑1 (MQ=255)
                                                                                                                  gccgcTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATAc                                        >  8:21607/1‑142 (MQ=255)
                                                                                                                       tGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAggcg                            >  2:14456/1‑149 (MQ=255)
                                                                                                                           gacAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGgcgc                        >  3:23357/1‑149 (MQ=255)
                                                                                                                              aaTGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCAc                     <  3:204934/149‑1 (MQ=255)
                                                                                                                                   ggCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAg                 >  2:24276/1‑148 (MQ=255)
                                                                                                                                   ggCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAg                 >  2:17956/1‑148 (MQ=255)
                                                                                                                                       tGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAAccc            >  3:48188/1‑149 (MQ=255)
                                                                                                                                       ggCGGCTGTTCCAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAAccc            >  5:6249/2‑149 (MQ=255)
                                                                                                                                       ggCGGCTGTTCCAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCACAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAAccc            >  6:232405/2‑149 (MQ=255)
                                                                                                                                         cGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGTTGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCcg           <  7:223532/148‑1 (MQ=255)
                                                                                                                                             tGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCCGCGAAg      >  3:342210/1‑149 (MQ=255)
                                                                                                                                              ggAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCCGCGAAGc     >  5:244633/1‑149 (MQ=255)
                                                                                                                                               gAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCCGCGAAg      <  7:386963/147‑1 (MQ=255)
                                                                                                                                                 aCAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCCGCGAAGCCAc  <  2:145543/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GCGCACCGGCACCTGCGCCGTACCATCCACCAGACGCGTCGTTACGGTCACGACGTAGCGGCGGCCGTCCTGATGCTGGTAGACCATACCGGCATCCACCAAGGCGTTATTAGCGCCGCTGACGACAATGGGGCCTGCGGCTGGAACAGCCGCCTTGCGCCCGTCCTTAAGGCGCCATTCGGCCCATTTCAGCAGCATCTCTTCATCGCAGGTCGCCGGGTGGGACTGCCGCGCGATCCACTCCTGATGGCCATACAGACCGTAGGCGGCGCCACTAAGAACCCGCGAAGCCAC  >  NC_002947/4385143‑4385436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑