| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,520,464 | A→G | 6.4% | intergenic (+55/+17) | cspD → / ← icd | DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,520,464 | 0 | A | G | 6.4% | 226.0 / 4.3 | 78 | intergenic (+55/+17) | cspD/icd | DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (38/35); new base G (3/2); total (41/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
CACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGT > NC_002947/4520320‑4520611 | cACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCgg > 5:61672/1‑149 (MQ=255) cGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGtt < 3:20681/149‑1 (MQ=255) cGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGtt > 7:27003/1‑149 (MQ=255) gCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGttt > 4:163825/1‑149 (MQ=255) tGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGt < 1:349672/149‑1 (MQ=255) aaaTCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCAGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGtt < 2:258317/148‑1 (MQ=255) aaTCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGc < 8:27003/149‑1 (MQ=255) tCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCt > 5:76926/1‑149 (MQ=255) cAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCt > 1:67756/1‑148 (MQ=255) aaaGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCtga > 5:343351/1‑147 (MQ=255) aGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACa > 6:335201/1‑149 (MQ=255) gATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACAt > 6:198846/1‑149 (MQ=255) cgcgGCCGCGGGGGATGAGGGTGCCTGCGCCTTGGGCTAGCCCAAACCCTAAACTGAAAACGCGTCAGTCCCTGCGCTGTGCCTTAACACAAAAAAATCGGCCGCTTCTTTAAAACAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGtt < 6:61672/149‑1 (MQ=255) gCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCAt < 4:181185/149‑1 (MQ=255) tGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCAttt > 6:2910/1‑149 (MQ=255) cGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTc < 6:76926/148‑1 (MQ=255) gCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATc > 3:319629/1‑149 (MQ=255) tctggCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGGCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGa < 8:56049/134‑1 (MQ=255) agagGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGc > 7:206097/1‑149 (MQ=255) agagGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAAACGGCCGCATCTTTAAAACAAG‑CGAACGGTTTTCTGTTGCCTTACATGTGtttta > 7:56049/1‑135 (MQ=255) gCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTCTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCaaa > 6:409164/1‑149 (MQ=255) cAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGTCGCTTCTTTTAAAGAAG‑CGGCCGAttttttt > 2:375212/1‑106 (MQ=37) cAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGTCGCTTCTTTTAAAGAAG‑CGGCCGAttttttt < 1:375212/109‑4 (MQ=37) cAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCt > 3:290789/1‑148 (MQ=255) gagCCTTGGGCGAGCCGCAAAGCGAAACTGCTAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCCGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGa < 1:105182/149‑1 (MQ=255) gagCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAg > 2:54226/1‑149 (MQ=255) cTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAgctgc > 3:163871/1‑149 (MQ=255) ttGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCaaa < 8:378447/137‑1 (MQ=255) ttGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCaaa > 7:378447/1‑137 (MQ=255) gggCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCtt < 6:233106/148‑1 (MQ=255) gacccGCCAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGCGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAg < 4:319629/146‑1 (MQ=255) cGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAGAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTg > 8:331144/1‑149 (MQ=255) aaaGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCGTTACATGTGTTTGATAATTTCATCGCCAAAGCCTGAGCTGCTTACACGCTTGgcg > 8:355936/1‑149 (MQ=255) aaaGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGgcg < 4:163871/149‑1 (MQ=255) aaaGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGgcg < 5:335201/149‑1 (MQ=255) cGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCt > 7:202040/1‑149 (MQ=255) gAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCt > 3:242738/1‑148 (MQ=255) aCTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCAt < 4:242738/149‑1 (MQ=255) aCTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCAt < 4:62871/149‑1 (MQ=255) aaGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGc > 7:154309/1‑149 (MQ=255) gccggcctgcctgcTCTGTGCCGATAGACAACAAAAGCGGCCGCTTCTTTAAACGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTc < 6:343351/143‑1 (MQ=255) ccTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCg < 4:290789/149‑1 (MQ=255) cTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTg > 2:144154/1‑127 (MQ=255) cctgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCg > 3:398029/1‑147 (MQ=255) cctgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCg > 1:2552/1‑147 (MQ=255) ctgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGt < 2:308059/147‑1 (MQ=255) ctgcGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGt > 1:308059/1‑147 (MQ=255) tgtgCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACg > 2:160623/1‑149 (MQ=255) gATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTg < 5:183021/149‑1 (MQ=255) aTAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTgg > 4:101271/1‑149 (MQ=255) tAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGc < 4:79623/149‑1 (MQ=255) aCAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCg > 5:318029/1‑148 (MQ=255) cAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGc > 8:12443/1‑148 (MQ=255) aaaaaaTCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAAt < 1:54226/149‑1 (MQ=255) aaaaaTCGGTCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATg > 8:276896/1‑149 (MQ=255) aTCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGgcgc < 8:154309/149‑1 (MQ=255) tCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGcc < 6:410708/149‑1 (MQ=255) ggtcGCTTCTTTTAAAGAAG‑CGGCCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCAt > 1:30046/4‑149 (MQ=255) gtcGCTTCTTTTAAAGAAG‑CGGCCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAAt > 6:289271/3‑140 (MQ=255) gtcGCTTCTTTTAAAGAAG‑CGGCCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAAt < 5:289271/138‑1 (MQ=255) gCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCAtt < 2:67756/149‑1 (MQ=255) ccGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTg < 8:202040/149‑1 (MQ=255) ccGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTg < 1:160623/149‑1 (MQ=255) gCTTCTTTAAAAGCAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGt < 3:373330/149‑1 (MQ=255) gCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGt > 8:229975/1‑149 (MQ=255) cttcttTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGTCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTgg > 6:347846/1‑129 (MQ=255) cttcttTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTgg < 5:347846/129‑1 (MQ=255) cttcttTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCACCATCAATCGCTCGAAATCGTAGGTCAAGGTCTTGGCCGCAATGCAGCCAATGGTg > 8:253593/1‑149 (MQ=255) tttAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCt > 6:156905/1‑149 (MQ=255) aaaaGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTtga > 7:119438/1‑149 (MQ=255) aaaGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGc > 2:16620/1‑122 (MQ=255) aaaGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGc < 1:16620/122‑1 (MQ=255) aaaGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTtgat < 4:398029/149‑1 (MQ=255) aaaGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCACCAATGGCGCCATtgc < 7:12443/148‑2 (MQ=255) aag‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATc < 7:331144/149‑1 (MQ=255) g‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAg < 5:198846/149‑1 (MQ=255) gACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGt < 7:276896/149‑1 (MQ=255) gACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGATCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGt > 2:354765/1‑149 (MQ=255) | CACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAG‑CGACCGGTTTTCTGTTGCCTTACATGTGTTTGATCATTTCATCGCCAAAGCCTGAGCTGCTTACCAGCTTGGCGCCCTCCATCAATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGT > NC_002947/4520320‑4520611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |