| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,563,790 | A→G | 10.8% | F24S (TTC→TCC) | vgrG‑III ← | type VI secretion system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,563,790 | 0 | A | G | 10.8% | 169.1 / 10.3 | 65 | F24S (TTC→TCC) | vgrG‑III | type VI secretion system protein |
| Reads supporting (aligned to +/- strand): ref base A (34/24); new base G (3/4); total (37/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01 | |||||||||||
GCCATGCACATGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATGAGAATATCGAA > NC_002947/4563642‑4563937 | gCCATGCACATGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTtga < 3:130361/149‑1 (MQ=255)gCCATGCACATGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTtga < 8:129105/149‑1 (MQ=255) cATGCACATGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTtgaat < 6:138073/149‑1 (MQ=255) acaTGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATTCAAGCTGGATGAAAc < 2:38004/149‑1 (MQ=255) aTGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCa > 7:105379/1‑149 (MQ=255) tGACGCAGTGGCCGGTCTGCGCTGTAAAGGGGGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTGCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATTCAAGCTGGATGAAAccct < 6:153695/149‑3 (MQ=255) gACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGCGGGTTTCATCCAGCTTGAATGAAACCACt > 5:233115/1‑149 (MQ=255) aCGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACtt > 3:139359/1‑149 (MQ=255) cGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTTATTCAAGCTGGATGAAAccctcaa < 6:69379/149‑6 (MQ=255) ccGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCg < 4:188486/149‑1 (MQ=255) cGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGt > 2:185791/1‑149 (MQ=255) cGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGt < 5:202616/149‑1 (MQ=255) cGGTCTGCGCTGTAAAGCGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGCTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGt > 6:165646/1‑149 (MQ=255) cTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGc < 6:233115/149‑1 (MQ=255) ggTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGcc > 1:387290/1‑137 (MQ=255) ggTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGcc < 2:387290/137‑1 (MQ=255) aaTAGCGCATGCTTGTCGAGGACGTGGCCGAAATCGATATAACTTTCGTAGCTCAATAGTTCCAGGTTCAGCACAAATGGCAGGTTGAGGGTTTCATCCATCTTGAATGAAAACACTTCAAATTACGAGAGACCGGCGAGCGCCTCaa > 8:179656/1‑148 (MQ=255) aaTAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGACCGGCGAGCTCCTGaa > 8:139274/1‑148 (MQ=255) gcgcAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACt > 2:403453/1‑148 (MQ=255) gcAGGCTTGTCGAGGACGTGGCCGAAAGCGATATCACTTGCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGaa < 4:240744/149‑1 (MQ=255) gcAGGCTTGTCGAGGACGGTGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGaa < 4:250117/149‑1 (MQ=255) cAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAg > 1:403326/1‑149 (MQ=255) gCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCg > 5:345441/1‑148 (MQ=255) ttGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGa > 3:228050/1‑147 (MQ=255) gAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCGGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCg > 3:159257/1‑148 (MQ=255) aGGACGTGGACGAAAACGATATAAATTTCTTAGCTCACAAGATCGAGGTTCAGCAGAAATGGCTGGTTGAGGGTTTCATCAAGATAGAAAGAAACCACTTCAAATTCCGTGCGACCGCCGAGCGCCTGAAAACTGAAGCTAAAGTCgg > 2:133208/1‑148 (MQ=255) gCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCGGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCa < 4:159257/149‑1 (MQ=255) gCCGAAATCGATATCAATTTCTTAGCTCACAAGTTCCATGTGCAGCACAAATGGCTGGTTGAGTGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCa < 7:179656/149‑1 (MQ=255) gAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGa < 8:105379/149‑1 (MQ=255) gAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGa < 2:337452/149‑1 (MQ=255) atatCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGctc > 3:331183/1‑149 (MQ=255) atatCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGctc > 1:59221/1‑149 (MQ=255) tatCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGctc > 6:159367/1‑148 (MQ=255) atCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCg < 6:154107/127‑1 (MQ=255) atCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCg > 5:154107/1‑127 (MQ=255) aCTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTAccc > 6:250073/1‑149 (MQ=255) tAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCAGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCcatca > 5:228255/1‑149 (MQ=255) cTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGt > 5:255621/1‑149 (MQ=255) tCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGtt > 8:97322/1‑149 (MQ=255) tCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGtt > 7:17762/1‑149 (MQ=255) tCACAAGTTCCAGGTTCAGCACAAATCGATGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCAGGCGAGCGCCTGAAAACTGAAGCGAAAGTCCGACTGTTTCATGAGTTGCTCTACCCGCCATCATGtt > 3:366200/1‑149 (MQ=255) acaAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGttt < 6:345441/148‑1 (MQ=255) acaAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTg > 7:43546/1‑149 (MQ=255) aGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGaa > 1:382146/1‑148 (MQ=255) ggTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGaaaa < 1:133208/149‑1 (MQ=255) aGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAaacaac < 1:185791/149‑1 (MQ=255) aGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAaacaac < 4:331183/149‑1 (MQ=255) acaAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACca > 6:194047/1‑148 (MQ=255) aTGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACAccc < 7:97322/149‑1 (MQ=255) aTGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACAccc < 6:255621/149‑1 (MQ=255) tGGCTGGTTGAGGGTTTCATCCAGCTTGAATGTAACCACTTCTAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGAGAAAGTCGGACTGTTTCATGAGTTGCTCTTCCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCt < 4:139359/149‑1 (MQ=255) gCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTgg < 8:43546/149‑1 (MQ=255) ggTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCtt > 7:66681/1‑149 (MQ=255) tgaagtggTTTCATTCAAGCTGGATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCAATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCtt > 4:343951/7‑148 (MQ=255) ttGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTttc < 5:250073/149‑1 (MQ=255) ttGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTttc > 4:318417/1‑149 (MQ=255) aGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTttctt < 5:194047/148‑1 (MQ=255) aGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTttctt > 3:103243/1‑148 (MQ=255) tggTTTCATTCAAGCTGGATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAaaca < 2:239988/127‑1 (MQ=255) tggTTTCATTCAAGCTGGATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAaaca > 1:239988/2‑128 (MQ=255) gTTTCATTCAAGCTGGATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTttcttc > 4:342948/1‑146 (MQ=255) tttCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTttcttc > 2:77910/1‑145 (MQ=255) aTCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATga < 2:59221/148‑1 (MQ=255) tCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATgag > 8:97958/1‑148 (MQ=255) cTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATGAGAATATc > 4:68634/1‑149 (MQ=255) cTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATGAGAATATc < 2:403326/149‑1 (MQ=255) ttGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGaaa < 2:379187/110‑1 (MQ=255) ttGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGaaa > 1:379187/1‑110 (MQ=255) gaatgaaACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATGAGAATATCGa < 1:403453/148‑1 (MQ=255) aatgaaACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATGAGAATATCGaa < 4:228050/148‑1 (MQ=255) | GCCATGCACATGACGCAGTGGCCGGTCTGCGCTGTAAAGGGTGAATAGCGCAGGCTTGTCGAGGACGTGGCCGAAATCGATATCACTTTCGTAGCTCACAAGTTCCAGGTTCAGCACAAATGGCTGGTTGAGGGTTTCATCCAGCTTGAATGAAACCACTTCAAATTCCGTGCGCCCGGCGAGCGCCTGAAAACTGAAGCGAAAGTCGGACTGTTTCATGAGTTGCTCTACCCGCCATCATGTTTGCCGGCGAAAAACAACCACACCCTGGCTTTCTTCAAGATGAGAATATCGAA > NC_002947/4563642‑4563937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |