| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,578,136 | C→A | 8.4% | E659* (GAG→TAG) ‡ | glgB ← | 1,4‑alpha‑glucan branching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,578,136 | 0 | C | A | 8.4% | 233.9 / 9.3 | 79 | E659* (GAG→TAG) ‡ | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base C (40/32); new base A (4/3); total (44/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.13e-01 | |||||||||||
CCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGG > NC_002947/4577989‑4578278 | ccACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTcg > 3:66270/1‑149 (MQ=255) cACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCTCCACCAGCACCGGCTcgc > 5:122290/1‑149 (MQ=255) ccccGAGATTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCgctg < 4:159207/149‑1 (MQ=255) gagaTTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCAGCGGCGAGCCggtgctgg < 4:30333/149‑2 (MQ=255) gaTTGCCGCCATTCGGCCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCAGCGGCGAGCCggtgctggtg < 1:371990/149‑4 (MQ=255) aTTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTc < 8:254059/148‑1 (MQ=255) ttGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTAGCGGGGTGAAGTTGGCCTCCACCAGCACCGGCTCGCCGCTGCTGCTCCa < 6:122290/149‑1 (MQ=255) ccGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGTTCGCCGCTGCTGCTCCAgcg > 3:148153/1‑149 (MQ=255) ccGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAgcg < 3:19540/149‑1 (MQ=255) ccGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAgc < 5:206000/148‑1 (MQ=255) ccGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAgc < 7:37614/148‑1 (MQ=255) cGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAgcg > 5:48856/1‑148 (MQ=255) cATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGc < 4:158920/149‑1 (MQ=255) aTTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGcc > 8:308909/1‑149 (MQ=255) ttCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCgctg > 3:242223/1‑132 (MQ=255) ttCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCgctg < 4:242223/132‑1 (MQ=255) ttCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGc > 2:58660/1‑147 (MQ=255) gACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGc < 6:48856/149‑1 (MQ=255) cccGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCg > 2:297066/1‑148 (MQ=255) gCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCGGCAGCTCGTGCAGCGGAGGCTGGGGTacac > 2:159550/1‑149 (MQ=255) acaccgcGGCCTCCCCGTTCAGCAGCTCCTGCCAACGCTCGCCGCACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTg < 8:257031/143‑1 (MQ=255) cAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTg < 1:58660/148‑1 (MQ=255) aGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGt > 7:234820/1‑148 (MQ=255) cTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTcgccgc < 2:62108/113‑1 (MQ=255) cTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTcgccgc > 1:62108/1‑113 (MQ=255) tCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGcgtc < 1:297066/149‑1 (MQ=255) tCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGcgtc < 2:372225/149‑1 (MQ=255) ttCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCAcc > 5:247656/1‑149 (MQ=255) cAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGa > 6:251591/1‑149 (MQ=255) gAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGAt > 7:111728/1‑148 (MQ=255) ccAACGCTCGCCGAACTGCACGCCAATGCGGTAACCCTCACGGGGAACCGGGGTTAAGTTGGCCAACACCAGCACCGGCTCGCCGCTGCTGCTACAGCACAGCAAGGCGTACACGATGTTCTGCGCGTCGTACCCGATCAACCACTgg > 6:178457/1‑148 (MQ=255) aCGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAAc < 7:308909/149‑1 (MQ=255) cGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAAcc < 5:251591/149‑1 (MQ=255) cGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGc > 5:200895/1‑149 (MQ=255) gAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCt < 7:141368/149‑1 (MQ=255) aCGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTgg < 8:111728/149‑1 (MQ=255) gCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCgctg < 1:85610/71‑1 (MQ=255) gCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCgctg > 2:85610/1‑71 (MQ=255) tcgacAATTCGGTAACCCTCACGTCGTACCGGGGTGAAGTTGGCCAACACCATCACCTGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGAGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATc < 5:178554/145‑1 (MQ=255) gCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCAAGCGAAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCTATAAACCACTGGAAACCCTCCGGCTGGCAATc > 6:178554/1‑147 (MQ=255) ggTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGACCCGGCTAGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATAAACCACTGGAAACCCTGCGGCTGGCAATCCAGCTCGTg > 1:282866/1‑148 (MQ=255) ccTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGcc > 3:153254/1‑149 (MQ=255) ccTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGcc < 4:153254/149‑1 (MQ=255) cACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGc > 6:239609/1‑149 (MQ=255) aCGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCgg < 3:251518/147‑1 (MQ=255) ggTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAGCCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGctctac > 5:410602/1‑147 (MQ=255) ggTACCGGGGTGAAGTTGGACACCATCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTTAGCCTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTc > 8:244735/1‑149 (MQ=255) tACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTcgc > 8:4573/1‑149 (MQ=255) ccGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTcgcg < 5:239609/148‑1 (MQ=255) ccGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCgg > 5:391800/1‑149 (MQ=255) cGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCgg > 3:359564/1‑148 (MQ=255) gggTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTAc < 5:398889/149‑1 (MQ=255) tGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAgg > 1:342054/1‑149 (MQ=255) gTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGt > 4:236882/1‑149 (MQ=255) ggCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGtt > 7:71572/1‑147 (MQ=255) gCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCgg > 3:265582/1‑144 (MQ=255) gCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCgg < 4:265582/144‑1 (MQ=255) gCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAg > 8:302725/1‑149 (MQ=255) caccaccaGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGt > 2:272232/1‑149 (MQ=255) caccaccaGCACCGACTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGt > 4:162590/1‑149 (MQ=255) tggagcagcagCGGCGAGCCGGTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTc > 3:193323/6‑149 (MQ=255) tggagcagcagCGGCGAGCCGGTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTc > 3:233987/6‑149 (MQ=255) accaccaGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTc > 1:155790/1‑149 (MQ=255) ccaccaGCACCGGTTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCGGGCTCTTCGCGGTACAGGCGGTTGAGGTCg < 4:148153/149‑1 (MQ=255) ccaccaGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCg > 4:298402/1‑149 (MQ=255) gcagcagCGGCGAGCCGGTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCt < 7:165227/92‑1 (MQ=255) gcagcagCGGCGAGCCGGTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCt > 8:165227/2‑93 (MQ=255) ccaGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGccc < 4:359564/149‑1 (MQ=255) ccaGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGcc > 1:321233/1‑148 (MQ=255) caGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCcca < 2:282866/149‑1 (MQ=255) caGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCcca > 8:202729/1‑149 (MQ=255) gCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTg < 2:122409/91‑1 (MQ=255) gCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTg > 1:122409/1‑91 (MQ=255) ccGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAgg > 6:196889/1‑149 (MQ=255) ccGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAgg > 5:279628/1‑149 (MQ=255) cGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAACCCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGa > 5:95438/1‑134 (MQ=255) cGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGa < 6:95438/134‑1 (MQ=255) gCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTcg > 6:47599/1‑116 (MQ=255) gCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTcg < 5:47599/116‑1 (MQ=255) tCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTgg > 7:187224/1‑84 (MQ=255) tCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTgg > 7:181913/1‑84 (MQ=255) tCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTgg < 8:181913/84‑1 (MQ=255) tCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTgg < 8:187224/84‑1 (MQ=255) | CCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGGCATCACTGTTCAGAAGCTCCTGCCAACGCTCGCCGAACGGCACGCCAATGCGGTAACCCTCACGGGGTACCGGGGTGAAGTTGGCCACCACCAGCACCGGCTCGCCGCTGCTGCTCCAGCGCAGCCAGGCGTACACGCTGTTCTGCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGG > NC_002947/4577989‑4578278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |