| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,632,499 | A→C | 6.5% | intergenic (+104/+55) | PP_4096 → / ← PP_t59 | hypothetical protein/tRNA‑Gly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,632,499 | 0 | A | C | 6.5% | 285.2 / 7.9 | 92 | intergenic (+104/+55) | PP_4096/PP_t59 | hypothetical protein/tRNA‑Gly |
| Reads supporting (aligned to +/- strand): ref base A (45/40); new base C (2/4); total (47/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
CTTTGAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGC > NC_002947/4632353‑4632643 | cTTTGAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAg > 3:142294/1‑149 (MQ=255) tttGAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAgg > 6:196787/1‑149 (MQ=255) tttGAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAgg > 5:199449/1‑149 (MQ=255) tGAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGGATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAgg < 7:353057/147‑1 (MQ=255) gAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGcc > 3:381835/1‑149 (MQ=255) aaaTACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCt > 7:197846/1‑149 (MQ=255) aaaTACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCt > 6:80701/1‑149 (MQ=255) aCCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCttttt > 8:93372/1‑149 (MQ=255) cccctggACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCttttt < 4:360134/142‑1 (MQ=255) cccGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCttttt < 2:132764/148‑1 (MQ=255) cGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCTTCGGGGCCTTTTTTcg < 8:134922/149‑2 (MQ=255) cGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGCAGGGCCTTTTTTc > 1:140215/1‑148 (MQ=255) gTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCaa < 6:246188/149‑1 (MQ=255) gTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATATCAATAAGGGCGGAAGAGATTGAGGCAGAATGAATTCGAACTAAAAAAGGCCCCGAAGGGCGtttttt > 1:131407/1‑148 (MQ=255) ttGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCTTCGGGGCCTTTTTTcgtt < 2:75574/149‑4 (MQ=255) ttGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAc < 7:74789/149‑1 (MQ=255) ttGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAc < 5:254422/149‑1 (MQ=255) ttGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAc < 6:415382/149‑1 (MQ=255) gACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCTTCGGGGCCTTTTTTcgttc < 2:302741/148‑5 (MQ=255) cgagATCAGCGATATCTCCAGGTAGCCCACGCCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTTCTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACt < 8:81527/146‑1 (MQ=255) cGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCtttt < 6:83046/139‑1 (MQ=255) cGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCtttt > 5:83046/1‑139 (MQ=255) cGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACt < 8:75946/149‑1 (MQ=255) aGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGCGCCTTTTTTCAACGACTTACAGa > 6:43555/1‑148 (MQ=255) atatGTCCAGGTAGCCCACGGCGTCGCGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAc < 7:306752/134‑1 (MQ=255) atatGTCCAGGTAGCCCACGGCGTCGCGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAc > 8:306752/1‑134 (MQ=255) tatGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGa < 4:142294/149‑1 (MQ=255) tGTCCAGGTAGCCCACGGCGTCACGGCAAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGACAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACt < 3:205896/149‑1 (MQ=255) tCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGAGTTGTGGTGTTTGAACTAGAATTTCGTAGAGGGCGG‑‑GGAATTGAGGAAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTg > 2:386346/1‑148 (MQ=255) ggTAGCCCACGGCGACACCGCCAGGGCGCCGCGTTGTGGTGTTTGTACATGAATTTCGTAGAGGGAGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTATTCAACGACTTACAGACTTCGACTGAAAcc > 2:352255/1‑149 (MQ=255) gTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCt > 7:297903/1‑149 (MQ=255) gTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCt < 6:227752/149‑1 (MQ=255) gTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCAGTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCt > 7:313878/1‑149 (MQ=255) gCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGt < 8:197846/148‑1 (MQ=255) gCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGt < 5:368319/148‑1 (MQ=255) cccACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTAGTAGAGGGCGG‑‑GGTATTGATGCAGAATGCATTCGAACGAAAAAATGACCCGAAGGGCCGTTTTTCAACGACTTACAGACTTCGACTGAAACCTg > 5:319944/1‑146 (MQ=255) aCGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATc > 1:278030/1‑149 (MQ=255) ggCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCtt < 6:193277/149‑1 (MQ=255) tCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCTTCGGGGCCttttt > 7:162536/1‑106 (MQ=255) tCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCTTCGGGGCCttttt < 8:162536/106‑1 (MQ=255) tCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTc > 5:327008/1‑125 (MQ=255) tCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTc < 6:327008/125‑1 (MQ=255) aCGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTAttt < 6:43180/148‑1 (MQ=255) aCGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTg < 5:43555/149‑1 (MQ=255) cGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTgg > 2:203260/1‑149 (MQ=255) aGGTCGCCGCTTTGTGTTTTTTGTACTTCAATTTAGTAGAGGGCGG‑‑TGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCgg < 3:38551/149‑1 (MQ=255) ggCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGa < 2:131407/149‑1 (MQ=255) cgccgcGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAAc > 7:343211/1‑122 (MQ=255) cgccgcGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAAc < 8:343211/122‑1 (MQ=255) cgccgcGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGaaa < 8:297903/149‑1 (MQ=255) cgcgTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACga < 6:231241/149‑1 (MQ=255) gtggtgTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCACTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTc < 8:313878/148‑1 (MQ=255) gtatGTACTTGAATATCGTAGAGGGAGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCACCGAAGGGCCTTGTTTAAACGACTTAAAGACTTCGACTGAAACCTGGTGATCTTTTTTTGGAGCGGGAAACGAGACTCGAACTc > 4:64771/4‑149 (MQ=255) tttGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTc < 5:80701/148‑1 (MQ=255) tGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTcgc < 7:93372/148‑1 (MQ=255) aCTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCgg > 5:65306/1‑125 (MQ=255) aCTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCgg < 6:65306/125‑1 (MQ=255) ttGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGaaa < 7:19384/127‑1 (MQ=255) ttGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGaaa > 8:19384/1‑127 (MQ=255) ttGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGAcccc > 4:311533/1‑149 (MQ=255) aTTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGAcc < 1:203260/149‑1 (MQ=255) tttCGTAGAGGGCGG‑‑GGTATTGGGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCt > 6:121904/1‑149 (MQ=255) tttCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCt > 6:46956/1‑149 (MQ=255) cGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTg < 6:199449/148‑1 (MQ=255) agagGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGc > 5:7168/1‑147 (MQ=255) agagGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGc > 6:279466/1‑147 (MQ=255) gggCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGt < 4:381835/149‑1 (MQ=255) ggCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTc > 4:335142/1‑149 (MQ=255) aTTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACga < 5:356025/107‑1 (MQ=255) aTTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACga > 6:356025/1‑107 (MQ=255) aGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCaa > 2:210946/1‑149 (MQ=255) aGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTAAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTAGCaa > 2:21365/1‑149 (MQ=255) ggCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAAc > 7:83069/1‑149 (MQ=255) gCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACt < 3:310530/149‑1 (MQ=255) aGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACt > 8:36884/1‑147 (MQ=255) aGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGa < 7:36884/149‑1 (MQ=255) aGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGa < 3:311533/149‑1 (MQ=255) aTGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGc > 1:232579/1‑148 (MQ=255) gCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTAc < 3:225888/137‑1 (MQ=255) gCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTAc > 4:225888/1‑137 (MQ=255) aTTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGGTCTACCAACTGAGCTATTc > 1:91104/1‑149 (MQ=255) ttCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGAGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCACTACCAACTGAGCTATTcc > 2:126123/1‑149 (MQ=255) gaaAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAAGGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTTAGCTATTCCCGcgtcg > 8:181383/1‑149 (MQ=255) gaaAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTGTACCAACTGAGCTATTGCCGcgtcg > 5:409778/1‑149 (MQ=255) aaaGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGAt < 1:210946/149‑1 (MQ=255) aGGCCCCTTAGGGGCTTTTTTCAACGACTTAGAGCCTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGAGTCGAACTGGCGACCCCGACCTTGTAAAGGTCGTGCTATAACAAGTGAGCTATTCCCGCGTCGTGATgg < 6:319944/149‑1 (MQ=255) cccGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGc > 8:123593/1‑149 (MQ=255) cccGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGc > 7:81163/1‑149 (MQ=255) cccGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGc > 5:122992/1‑149 (MQ=255) cccGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGc > 2:256716/1‑149 (MQ=255) gAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTCGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAAc < 4:252425/118‑1 (MQ=255) gAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTCGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAAc > 3:252425/1‑118 (MQ=255) | CTTTGAAATACCCGTTGACGTGATCAGCGATATGTCCAGGTAGCCCACGGCGTCACGGCCAGGGCGCCGCGTTGTGGTGTTTGTACTTGAATTTCGTAGAGGGCGG‑‑GGTATTGAGGCAGAATGCATTCGAACGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGACTGAAACCTGTAGATCTTTATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGTGATGGGTGC > NC_002947/4632353‑4632643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |