| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,707,318 | C→G | 8.0% | intergenic (‑20/+90) | PP_4163 ← / ← PP_4164 | hypothetical protein/alpha/beta hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,707,318 | 0 | C | G | 8.0% | 261.1 / 8.7 | 85 | intergenic (‑20/+90) | PP_4163/PP_4164 | hypothetical protein/alpha/beta hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (42/36); new base G (3/4); total (45/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
CTCCGTCGCCGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGCC > NC_002947/4707170‑4707458 | cTCCGTCGCCGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACGGGTAGGCTGGCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTc < 1:405111/149‑1 (MQ=255) gggCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTTGCGAGCACCAGGCAGTCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTGAGCGCCgcct < 6:417182/149‑4 (MQ=255) gCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTg < 4:346511/149‑1 (MQ=255) cGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGTCGAACCAGGCGGCGCTCAGCGCCGAATTGa < 1:221109/149‑1 (MQ=255) cGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGa < 1:178332/149‑1 (MQ=255) cGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGa < 6:397407/149‑1 (MQ=255) gTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCa > 1:192943/1‑136 (MQ=255) gTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCa < 2:192943/136‑1 (MQ=255) ttGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAg > 5:179326/1‑149 (MQ=255) gATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCt > 2:287711/1‑149 (MQ=255) aTCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTc < 8:273958/149‑1 (MQ=255) aTCGACCACCTTAGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTc > 6:402338/1‑149 (MQ=255) gACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAg < 7:278199/149‑1 (MQ=255) accaccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGCGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAACCAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAg > 3:54848/1‑148 (MQ=255) ccaccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGa > 8:66368/1‑149 (MQ=255) caccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAt > 7:82214/1‑149 (MQ=255) caccTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAt < 6:137544/149‑1 (MQ=255) ccTTAGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑Gt < 5:402338/149‑1 (MQ=255) cTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTc > 1:22659/1‑149 (MQ=255) gCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCTGGAT‑GTCTGGc > 6:126247/1‑149 (MQ=255) gCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTgg < 7:378465/148‑1 (MQ=255) cGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCa < 7:66368/149‑1 (MQ=255) tCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTGAGCGCCgcct < 6:357299/125‑4 (MQ=255) tCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTGAGCGCCgcct > 5:357299/1‑122 (MQ=255) cTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTg > 5:197598/1‑149 (MQ=255) gggACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCa < 1:234163/129‑1 (MQ=255) gggACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCa > 2:234163/1‑129 (MQ=255) ggACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGtt > 8:365759/1‑143 (MQ=255) ggACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGtt < 7:365759/143‑1 (MQ=255) gACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGt > 3:265941/1‑149 (MQ=255) ccGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTg < 7:323331/149‑1 (MQ=255) cGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGt > 3:47050/1‑149 (MQ=255) gTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGTACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCa < 1:59613/122‑1 (MQ=255) gTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCa < 3:354538/122‑1 (MQ=255) gTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCa > 4:354538/1‑122 (MQ=255) gTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCa > 2:59613/1‑122 (MQ=255) tAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGtctc > 7:134249/1‑149 (MQ=255) gCTGCCGGCCCACGACACGGGTGTGGCGAGCACCAGGCAGGCAGCCTAGGCAGTGAGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCTAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCt < 7:142319/149‑1 (MQ=255) gCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCt < 5:99692/149‑1 (MQ=255) gCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTcc < 3:67508/144‑1 (MQ=255) gCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTcc > 4:67508/1‑144 (MQ=255) cACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCg > 6:39591/1‑149 (MQ=255) aCGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGc > 3:317046/1‑149 (MQ=255) gggggTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGa < 1:385249/103‑1 (MQ=255) gggggTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGa > 2:385249/1‑103 (MQ=255) ggggTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGATGGTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCt < 1:287711/149‑1 (MQ=255) ggCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGacac > 1:192126/1‑149 (MQ=255) gCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACCCt > 5:93989/1‑149 (MQ=255) cGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGtt < 8:224941/126‑1 (MQ=255) cGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGtt > 7:224941/1‑126 (MQ=255) cGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACtt < 2:192126/149‑1 (MQ=255) aaCCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTACAGGAT‑GTCTGTCATTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGAcc > 6:343856/2‑149 (MQ=255) aCCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATgg < 4:265470/108‑1 (MQ=255) aCCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATgg > 3:265470/1‑108 (MQ=255) caggcaggCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCAAAGCCTCGACACTTGTACGGt > 7:174051/1‑149 (MQ=255) gcaggaaaCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGAGAACCAGGCGGCCCTCAGATCCGAATTGAAGCTCAAGGAT‑CTCTGCAAGTTGCATGGTTGTCTCCCTGTTCAACCCGACAAGCCTCGCCACTTGTCCGCTGc > 6:404973/1‑148 (MQ=255) caggcagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCaa < 4:317046/149‑1 (MQ=255) aggcagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGACGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCACGCCTCGACACTTGTCCGGTGCAAg > 8:208508/1‑149 (MQ=255) gcagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCTGCCAAGCCTCGACACTTGTCCGGTGCAAGt > 8:270622/1‑148 (MQ=255) gcagCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGt > 7:9630/1‑148 (MQ=255) agCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTc > 2:136316/1‑136 (MQ=255) agCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTc < 1:136316/136‑1 (MQ=255) gCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGtt < 6:68098/84‑1 (MQ=255) gCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGtt > 5:68098/1‑84 (MQ=255) gAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaagaa < 8:9630/149‑1 (MQ=255) gAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaag > 6:65850/1‑147 (MQ=255) aaTGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGc > 7:250152/1‑136 (MQ=255) aaTGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGc < 8:250152/136‑1 (MQ=255) aTGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAaagaag < 8:134249/148‑1 (MQ=255) tGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGTAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCg < 7:147570/149‑1 (MQ=255) tGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCaa < 4:182315/127‑1 (MQ=255) tGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCaa > 3:182315/1‑127 (MQ=255) aCAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGa < 5:39591/149‑1 (MQ=255) cAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGAt < 4:265941/149‑1 (MQ=255) gCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGTCACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACa > 8:210359/1‑149 (MQ=255) gCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTggt > 1:117913/1‑144 (MQ=255) gCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTggt < 2:117913/146‑3 (MQ=255) cATTGGCGAACCAGCCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑TTCTGGCAGTTGCATGCTTGTCTCCCTGTTCAACCAGCCAAGCCACGACACTTCTCCGGTGCAAGTCAACCAAAGCCAAAGAAGCGATTg > 4:138318/1‑137 (MQ=255) cATTGGAGAACCAGGCGGCGCTGATCGCCGTATTGAAGCTCCAGGAT‑TTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACAGTTGTCCGGTGAAAGTCAAGCAAAGCCAAAGAAGCGATTg < 3:138318/137‑1 (MQ=255) gAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAggg > 6:155785/1‑149 (MQ=255) ttcaattcggcgCTGAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGc > 3:8525/8‑149 (MQ=255) cAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTgc < 6:179326/149‑1 (MQ=255) aattcggcgCTGAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGc > 8:345384/5‑98 (MQ=255) aattcggcgCTGAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGc < 7:345384/94‑1 (MQ=255) aGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTgcg > 2:68103/1‑149 (MQ=255) gcggcgCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGcc > 1:361119/1‑149 (MQ=255) | CTCCGTCGCCGGGCGTTGATCGACCACCTTGGCGTCCTGCGGGACCGGTAGGCTGCCGGCCCACGACACGGGGGTGGCGAGCACCAGGCAGGCAGCCAAGGCAGTGCGAATGGAAACAGGCACGCTCATTGGCGAACCAGGCGGCGCTCAGCGCCGAATTGAAGCTCCAGGAT‑GTCTGGCAGTTGCATGGTTGTCTCCCTGTTCAACCCGCCAAGCCTCGACACTTGTCCGGTGCAAGTCAAGCAAAGCCAAAGAAGCGATTGATACAGTCTGCAACAAGGGCTGCGCC > NC_002947/4707170‑4707458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |