| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,891,874 | T→C | 5.1% | Y346H (TAC→CAC) | ttuD → | hydroxypyruvate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,891,874 | 0 | T | C | 5.1% | 235.3 / 2.2 | 78 | Y346H (TAC→CAC) | ttuD | hydroxypyruvate reductase |
| Reads supporting (aligned to +/- strand): ref base T (32/42); new base C (2/2); total (34/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
TTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTCG > NC_002947/4891728‑4892021 | ttCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTAc > 7:240136/1‑149 (MQ=255) cacGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCt > 1:303539/1‑149 (MQ=255) cacGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCt > 2:362696/1‑149 (MQ=255) ccAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCg < 2:303539/149‑1 (MQ=255) cAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCgg < 3:220979/149‑1 (MQ=255) cAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCgg < 7:13637/149‑1 (MQ=255) aGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCGCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGt < 1:320988/149‑1 (MQ=255) cGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGa > 7:380089/1‑148 (MQ=255) cGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGa > 7:322248/1‑148 (MQ=255) cTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGacac > 7:85356/1‑149 (MQ=255) aaaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGa < 2:291683/149‑1 (MQ=255) aaaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTACTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGa > 3:163647/1‑149 (MQ=255) aaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTgg > 3:344481/1‑135 (MQ=255) aaGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTgg < 4:344481/135‑1 (MQ=255) aGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACg < 7:348826/149‑1 (MQ=255) gcgcCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACgg < 6:108597/149‑1 (MQ=255) gcgcCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACgg < 4:70707/149‑1 (MQ=255) cccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTACACGcccggcag > 7:81529/1‑127 (MQ=255) cccTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTACACGcccggcag < 8:81529/132‑6 (MQ=255) cccTGCGTGATCCTGTCGGGTGGCGAAACAACCGTGACCGTGCGCGGCAATGGACGTGGCGGGCGTAAAGCCTAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCAt > 8:6677/1‑149 (MQ=255) cGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGa < 2:24096/147‑1 (MQ=255) cGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGa < 8:113904/147‑1 (MQ=255) cGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGAt < 2:283923/148‑1 (MQ=255) cGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGAt < 1:362696/148‑1 (MQ=255) tGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGAt > 7:63986/1‑146 (MQ=255) tGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGAt < 8:63986/146‑1 (MQ=255) tGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGc > 5:94777/1‑149 (MQ=255) tCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGgaa < 2:402996/147‑1 (MQ=255) gTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAAc > 3:371924/1‑149 (MQ=255) tGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACg > 4:234226/1‑149 (MQ=255) cGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCg < 2:118959/149‑1 (MQ=255) caccGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACg < 8:119075/95‑1 (MQ=255) caccGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACg > 7:119075/1‑95 (MQ=255) gtgaccgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCAt < 2:90172/149‑1 (MQ=255) gtgaccgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCAt < 5:214666/149‑1 (MQ=255) cgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGAccc < 8:380089/149‑1 (MQ=255) cgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGAccc > 6:204814/1‑149 (MQ=255) cgtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGAccc > 7:375399/1‑149 (MQ=255) gtgCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGAcccc < 5:18606/149‑1 (MQ=255) cgcgGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCgg < 8:85356/148‑1 (MQ=255) cgcgGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGc < 4:260591/149‑1 (MQ=255) ggCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑g > 1:380511/1‑149 (MQ=255) cAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑Gc > 4:120943/1‑148 (MQ=255) cAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCt < 1:59625/149‑1 (MQ=255) tGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGga < 3:316071/111‑1 (MQ=255) tGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGga > 4:316071/1‑111 (MQ=255) gCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGc < 5:299205/148‑1 (MQ=255) ccGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCa < 1:174920/149‑1 (MQ=255) ccGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCa < 8:375399/149‑1 (MQ=255) gcgggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAgc‑gc < 4:371924/148‑1 (MQ=255) gggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAgc‑gcggc > 5:339566/1‑146 (MQ=255) gggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑Gcc > 5:135956/1‑147 (MQ=255) gggcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑Gcc < 6:135956/147‑1 (MQ=255) gcgTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAg > 6:173072/1‑149 (MQ=255) tAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCt > 1:117558/1‑149 (MQ=255) cGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTgg < 7:110350/149‑1 (MQ=255) ccGAGTTCCTGCTCAGCCTCCCCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGc < 8:322248/149‑1 (MQ=255) ccGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGc > 3:288242/1‑149 (MQ=255) gAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCTGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCt > 4:323154/1‑149 (MQ=255) ccTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCg < 2:380511/148‑1 (MQ=255) cTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGc < 6:251015/141‑1 (MQ=255) cTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGc > 5:251015/1‑141 (MQ=255) cTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCa < 7:6677/148‑1 (MQ=255) tCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGc > 5:83954/1‑149 (MQ=255) gCCTCACCGAACGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGcgac < 1:189175/149‑1 (MQ=255) aCCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCt > 6:201809/1‑149 (MQ=255) ccGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTg > 6:270696/1‑149 (MQ=255) aaaGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGac < 2:117558/149‑1 (MQ=255) aaGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACTTTTTCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGac < 1:334262/148‑1 (MQ=255) aGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCTGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGacaa < 3:323154/149‑1 (MQ=255) cTGAAAGGCCTGCCGGGCGTGTTCGCCCTGGCCGGGGACACCGACGGCATCGATGGCGCGGAAGAAAACGCCGGTGCCTTCATTACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCg < 1:160759/126‑1 (MQ=255) tGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCAACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGacaacaa > 5:15975/1‑148 (MQ=255) gAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGacaacaac > 3:221686/1‑148 (MQ=255) aaGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACaacaacaac < 8:240136/149‑1 (MQ=255) ggccagggCGTACACGCCC‑GGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggctac > 5:118754/6‑149 (MQ=255) ccGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACaacaacaac < 4:371084/141‑1 (MQ=255) ccGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACaacaacaac > 3:371084/1‑141 (MQ=255) cagggCGTACACGCCC‑GGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAacggctacggc < 6:118754/147‑1 (MQ=255) tcttgtACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACggctacggctac < 7:108248/146‑1 (MQ=255) gtgtACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGATGCCTTCATGACCCCGGCGAGGCTACGCCATCGGGCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACggctacggctac > 1:125302/1‑149 (MQ=255) tgtACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTc > 5:94734/1‑149 (MQ=255) tACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTcg < 5:173072/148‑1 (MQ=255) | TTCAACACGGCCAGCCGCTCAAAGCGCCCTGCGTGATCCTGTCGGGTGGCGAAACCACCGTGACCGTGCGCGGCAATGGCCGTGGCGGGCGTAACGCCGAGTTCCTGCTCAGCCTCACCGAAAGCCTGAAAGGCCTGCCGGGCGTGTACGCCCTGGCCGGTGACACCGACGGCATCGATGGCTCGGAAGAAAACGCCGGTGCCTTCATGACCCCGGCCA‑GCTACGCCAGC‑GCCGAAGCCTTGGGCCTGTCGGCCAGCGACGAGCTGGACAACAACAACGGCTACGGCTACTTCG > NC_002947/4891728‑4892021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |