| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,900,069 | G→A | 8.5% | intergenic (+30/‑468) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,900,069 | 0 | G | A | 8.5% | 201.2 / 6.5 | 70 | intergenic (+30/‑468) | PP_4308/PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| Reads supporting (aligned to +/- strand): ref base G (31/33); new base A (4/2); total (35/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.51e-01 | |||||||||||
TGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCAA > NC_002947/4899922‑4900215 | tgtgCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGt < 5:155637/149‑1 (MQ=255) cTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCcgc < 2:152836/149‑1 (MQ=255) tCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCcgc > 6:20361/1‑148 (MQ=255) gATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCcgcg > 6:403754/1‑147 (MQ=255) tGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAaga < 3:110961/149‑1 (MQ=255) gAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTACTGGCCTCTTCGCGGGCACGCCTGCGAaga‑g < 3:174133/148‑1 (MQ=39) agcagcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGc < 4:291442/149‑1 (MQ=255) gcagcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGc > 7:367530/1‑148 (MQ=255) agcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAg > 3:299872/1‑149 (MQ=255) agcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAg > 8:221561/1‑149 (MQ=255) agcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGGCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTACTGGCCTCTTCGCGGGCACGCCTGCGAAGA‑GGCCAg < 6:265963/149‑1 (MQ=38) ggACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTa > 8:345548/1‑147 (MQ=255) acacCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAgg < 1:157661/149‑1 (MQ=255) ccTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGaa > 1:316830/1‑147 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAg > 4:293502/1‑137 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAg < 3:293502/137‑1 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGa < 5:6452/147‑1 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGa < 4:164847/147‑1 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGa < 6:196638/147‑1 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGa < 5:403754/147‑1 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGa < 2:316830/147‑1 (MQ=255) tCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAaga > 8:199008/1‑122 (MQ=255) aaTGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGt < 7:221561/149‑1 (MQ=255) aTGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTa < 8:367530/149‑1 (MQ=255) gCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACaaaaa < 1:6735/149‑1 (MQ=255) ccGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAAc < 3:262143/149‑1 (MQ=255) agaCCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTa < 4:299872/149‑1 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGc > 7:22937/1‑103 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGc < 8:22937/103‑1 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAAc < 1:235610/142‑1 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAAc > 2:235610/1‑142 (MQ=255) cAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCAGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCAGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTATTGTACACAAAAACGTCAcc > 7:128094/1‑148 (MQ=255) tACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAg > 3:264976/1‑149 (MQ=255) tACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAg > 1:52993/1‑149 (MQ=255) ccGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGt < 5:352695/149‑1 (MQ=255) cgcgATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTg > 8:21303/1‑149 (MQ=255) gcgATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGAGTTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTg > 1:304288/1‑149 (MQ=255) gATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCa > 8:167083/1‑149 (MQ=255) tcaAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAAc < 8:23601/133‑1 (MQ=255) tcaAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAAc > 7:23601/1‑133 (MQ=255) aagaagACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTtgt < 6:141545/149‑1 (MQ=255) agaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACaaaa > 4:323202/1‑123 (MQ=255) agaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACaaaa < 3:323202/123‑1 (MQ=255) gaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTAtttt < 6:413243/110‑1 (MQ=255) gaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTAtttt > 5:413243/1‑110 (MQ=255) aagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTtgtgtg > 1:131707/1‑149 (MQ=255) cccGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACtt > 7:2331/1‑149 (MQ=255) cccGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACtt < 7:167083/149‑1 (MQ=255) cGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTttc > 4:403093/1‑149 (MQ=255) ggTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTttct < 7:21303/149‑1 (MQ=255) aaGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCa < 7:345548/148‑1 (MQ=255) gcggTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCGATTTTTGTGTGCACTTTCTTCAGt > 8:71778/1‑145 (MQ=255) gcggTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGt < 7:71778/145‑1 (MQ=255) cggTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGgcgc < 5:372255/149‑1 (MQ=255) cAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGt > 1:56851/1‑149 (MQ=255) gattga‑ttGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTaca < 2:304288/148‑1 (MQ=255) gattga‑ttGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTaca > 3:175405/1‑148 (MQ=255) ggCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCa > 6:304446/1‑149 (MQ=255) tgtgCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCctct > 7:125339/1‑149 (MQ=255) tgCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACttt < 6:237157/106‑1 (MQ=255) tgCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACttt > 5:237157/1‑106 (MQ=255) cTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTAtt < 4:264976/148‑1 (MQ=255) ggCCTCTTCGCGGGCACGCCTGCGAAGA‑GGCCAGCACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTAtttt > 6:414628/1‑148 (MQ=39) ctctTCGCGGGCACGCCTGCGAAGAGGGCCGGCCCAGGAAAAGCTGAGTTTTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGGGTGCAGTTGCTGCAGTGGCGCCCCAATACGTTCCCCACTTGCCACCCTCATTTTTgcc > 1:223604/1‑147 (MQ=255) ctctTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAcc < 1:162474/149‑1 (MQ=255) tctTCGCGGGCACGCCTGCGAAGA‑GGCCAGCACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAcc > 8:125867/1‑148 (MQ=39) ctTCGCGGGCACGCCTGCGAAGA‑GGCCAGCACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCa > 2:88700/1‑148 (MQ=39) gCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAGAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGa > 6:319929/1‑149 (MQ=255) aGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATc < 2:56851/149‑1 (MQ=255) gCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCaa > 8:31355/1‑149 (MQ=255) | TGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGGCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGA‑GGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCAA > NC_002947/4899922‑4900215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |