| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,937,119 | A→T | 5.9% | E38V (GAA→GTA) | PP_4345 → | GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,937,119 | 0 | A | T | 5.9% | 253.5 / 4.1 | 85 | E38V (GAA→GTA) | PP_4345 | GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (39/41); new base T (3/2); total (42/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.80e-01 | |||||||||||
CGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGATTGAA > NC_002947/4936972‑4937267 | cgcTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGaa < 2:108680/149‑1 (MQ=255) gcTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACCCGAAGGCATACTTTCTGGCGCAATAGCCGAAg > 1:307579/1‑149 (MQ=255) ttttGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAgg > 1:210819/1‑148 (MQ=255) cTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCt > 4:821/1‑149 (MQ=255) tACATCGCTAGACCCGGAGAACATGGTGGAGAACTCTCTCGATAGATTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCt‑t > 6:96210/1‑149 (MQ=255) aCATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTAGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGCATTATGTGGTCGAGTCGCTACGCGAAGGCATACTATCTGGCGCAATATCCGAAGTTAAGGAt‑tt > 5:232373/1‑149 (MQ=255) aTCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTAc < 5:14328/141‑1 (MQ=255) aTCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTAc > 6:14328/1‑141 (MQ=255) aTCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTgc < 3:46974/149‑1 (MQ=255) aTCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTgc < 1:407221/149‑1 (MQ=255) aTCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATAGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTGGAGTCGCTAAGCGAAGGCATACTTTCTGGTGGAATAGCCGAAGGTACGGCT‑TTgc > 2:16373/1‑149 (MQ=255) aTCGCTAGACCCGGAGAACATGGTGGAGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTgc > 2:63274/1‑149 (MQ=255) cGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTgcgc > 5:185860/1‑149 (MQ=255) tAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaa < 2:314297/149‑1 (MQ=255) cccGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaag > 2:18616/1‑146 (MQ=255) ccGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaagaa < 6:170807/147‑1 (MQ=255) ccGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaagaa > 5:170807/1‑147 (MQ=255) ccGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAagaa‑ga < 3:366244/149‑1 (MQ=255) gaACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAg < 1:194807/149‑1 (MQ=255) acttggtggCTAACTCTCTCGTTAGCTTTATCGTTCCTGACAATCATGGCCATAAAACCGCGATTGATTATGTGGTCGAGTCGCTACGCGAAGGCATAGTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGc < 2:343572/145‑1 (MQ=255) cATGGTGGCTAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTGGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCt < 2:393189/149‑1 (MQ=255) ggtggCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAg > 5:229186/1‑116 (MQ=255) ggtggCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAg < 6:229186/116‑1 (MQ=255) gtggCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaa < 2:118261/132‑1 (MQ=255) gtggCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaa > 1:118261/1‑132 (MQ=255) gAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCg < 7:49947/149‑1 (MQ=255) aaCTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCgg < 5:61562/149‑1 (MQ=255) aaCTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCgg < 6:185860/149‑1 (MQ=255) aCTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAA‑AGCCGTACCTTCGGCTATTGCGCCa < 5:48767/124‑1 (MQ=38) aCTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAA‑AGCCGTACCTTCGGCTATTGCGCCa > 6:48767/1‑124 (MQ=38) ctctcGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaa < 7:333395/122‑1 (MQ=255) ctctcGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCaa > 8:333395/1‑122 (MQ=255) tctcGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGttt < 7:236165/147‑1 (MQ=255) ctcGATAGCTTTATCGTTCCTTACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGa < 5:96210/148‑1 (MQ=255) gATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCg > 5:395027/1‑149 (MQ=255) aTAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCg > 2:60439/1‑148 (MQ=255) tAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGGGTCGTa < 5:244583/149‑1 (MQ=255) tttATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGcc > 2:375055/1‑149 (MQ=255) ttATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCg > 8:114731/1‑149 (MQ=255) tATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGc < 3:821/146‑1 (MQ=255) tCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGTAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGa < 1:94845/135‑1 (MQ=255) tCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGa > 2:94845/1‑135 (MQ=255) tCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGa > 2:89344/1‑135 (MQ=255) tCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGa < 1:89344/135‑1 (MQ=255) cGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGt > 2:353314/1‑147 (MQ=255) gTTCCTGACAAACATCGCCATAAAACGGCGATGGATTATGTGGTCGAGTGGCTACGCGAAGTCATACTTTCTGGCGCAATAGACGAATTTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAATTTCGGTTTGAGTCGTATGCCGGTaa < 6:232373/148‑1 (MQ=255) gTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAT‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAg > 5:354914/1‑149 (MQ=255) ttCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAgg < 7:114731/149‑1 (MQ=255) ttCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAgg < 1:60439/149‑1 (MQ=255) cTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGa < 1:375055/148‑1 (MQ=255) aCAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGc > 1:171755/1‑148 (MQ=255) aaaCATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAACGAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCg < 1:272048/136‑1 (MQ=255) aaaCATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGaaa < 2:244758/114‑1 (MQ=255) aaaCATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGaaa > 1:244758/1‑114 (MQ=255) aaaCATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCg > 2:272048/1‑135 (MQ=255) aaCATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATa < 6:395027/149‑1 (MQ=255) cATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAg > 4:260955/1‑149 (MQ=255) tCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAgg > 8:86174/1‑148 (MQ=255) gCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAg > 6:322860/1‑149 (MQ=255) ccATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGt > 4:168302/1‑149 (MQ=255) aaaCCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAg < 6:354914/149‑1 (MQ=255) ccGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GCGCTAGCCTCGAAATTCGGATTGAGTCGTATGCCGGTAAGGGACGCCAAAAGGCAGTTGGAGTcc > 5:103000/1‑149 (MQ=255) aTTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCtt < 2:210819/149‑1 (MQ=255) ttATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAg < 5:33441/136‑1 (MQ=255) ttATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAg > 6:33441/1‑136 (MQ=255) tgtgGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGtt < 1:183746/148‑1 (MQ=255) gTCGAGTCGCAACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGAATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTa > 6:122928/1‑149 (MQ=255) tCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTAc > 4:95521/1‑149 (MQ=255) gTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCAt < 6:334221/111‑1 (MQ=255) gTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCAt > 5:334221/1‑111 (MQ=255) cgcgAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATaa < 3:345203/149‑1 (MQ=255) gAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATa < 8:120859/145‑1 (MQ=255) gAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATa > 7:120859/1‑145 (MQ=255) gAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAggg > 7:158488/1‑149 (MQ=255) ggCATACTTTCTGGCGCAATAGACGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCATCGAAATTAGGTGTGAGTCGTATGCCGGTAAGGGACGCGATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGCAGTCCATAAGGGGGc > 6:328105/1‑149 (MQ=255) aTACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGT‑CATAAGGGGGCctct > 3:68480/1‑149 (MQ=255) tcttcttGGCGCAA‑AGCCGTACCTTCGGCTATTGCGCC‑AGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGt > 5:123111/7‑149 (MQ=37) cTTTCTGGAGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGTTCGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTg < 2:307579/148‑1 (MQ=255) tttCTTGCTCAATAGCCGAAGGTACTGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGTGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTa < 1:63274/149‑1 (MQ=255) ttcttGGCGCAA‑AGCCGTACCTTCGGCTATTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTg > 5:93428/5‑147 (MQ=38) tCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTa < 1:353314/147‑1 (MQ=255) cgcAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACGTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCa < 7:86174/149‑1 (MQ=255) ccGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAATTTCGGTATGTGTCGTATGCCGTTAAGGGACGCGATAATGCTGTTGGAGGCCGAAGGGGTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGAt < 7:293066/148‑1 (MQ=255) ccGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGa > 5:218247/1‑147 (MQ=255) ccGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGa < 6:218247/147‑1 (MQ=255) gAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGATTGa < 8:158488/149‑1 (MQ=255) aaGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGATTGaa < 1:18616/149‑1 (MQ=255) | CGCTTTTGACTACATCGCTAGACCCGGAGAACATGGTGGCGAACTCTCTCGATAGCTTTATCGTTCCTGACAAACATCGCCATAAAACCGCGATGGATTATGTGGTCGAGTCGCTACGCGAAGGCATACTTTCTGGCGCAATAGCCGAAGGTACGGCT‑TTGCGCCAAGAA‑GAGCTAGCCTCGAAATTCGGTTTGAGTCGTATGCCGGTAAGGGACGCCATAAGGCAGTTGGAGGCCGAAGGGCTTGTTACCTACGAAGTCCATAAGGGGGCCTCTGTAGCGATCATGACGATTGAA > NC_002947/4936972‑4937267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |