| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,322,736 | C→A | 6.2% | K172N (AAG→AAT) | mrcB ← | transglycosylase/transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,322,736 | 0 | C | A | 6.2% | 235.9 / 2.9 | 74 | K172N (AAG→AAT) | mrcB | transglycosylase/transpeptidase |
| Reads supporting (aligned to +/- strand): ref base C (34/35); new base A (3/2); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
TACTGCCACCCTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGC > NC_002947/5322588‑5322882 | tACTGCCACCCTGGCGCATCGAGCCGGACGACGTGTGGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTgatcgatc < 1:170210/149‑1 (MQ=255) cTGCCACCCTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCtt < 8:64404/149‑1 (MQ=255) cTGCCACCCTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCtt > 3:354666/1‑149 (MQ=255) cTGCCACCCTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCt < 2:5821/148‑1 (MQ=255) ccACCCTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGAt > 3:343379/1‑149 (MQ=255) cccTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAg < 3:206879/149‑1 (MQ=255) cccTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAg < 4:343379/149‑1 (MQ=255) cccTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCAAGATCGATCAg < 3:321712/149‑1 (MQ=255) cccTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCAAGATCGATCAg > 4:321712/1‑149 (MQ=255) cccTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGAACCTGATCAAGATCGATCAg < 4:237108/149‑1 (MQ=255) cccTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACACGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAg > 3:326229/1‑149 (MQ=255) cATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGt < 7:41218/149‑1 (MQ=255) aTCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCg > 5:162300/1‑146 (MQ=255) aTCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCg < 6:162300/146‑1 (MQ=255) aGCCGGTCGTCGTGTTGACCGACATGGCCGGGTCGAGGGACTTTGGCGACACGCCGAAGTGGCTGTAGATCTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGTTCTTGATCAGGATGCGGTCTTCg < 2:88104/149‑1 (MQ=255) aGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTc > 6:334952/1‑148 (MQ=255) ccGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTc > 4:281723/1‑146 (MQ=255) ttGACCCACATGGCCCGGACAATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCACATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCggg > 2:90437/1‑147 (MQ=255) ccACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCg < 4:311594/140‑1 (MQ=255) ccACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCg > 3:311594/1‑140 (MQ=255) ccACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATgc > 5:123347/1‑149 (MQ=255) ccACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATgc > 3:394162/1‑149 (MQ=255) cacaTGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATgcc > 3:337748/1‑149 (MQ=255) cGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGc < 4:354666/149‑1 (MQ=255) gATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTc > 5:191571/1‑124 (MQ=255) gATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTc < 6:191571/124‑1 (MQ=255) gATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCg > 8:146390/1‑149 (MQ=255) gATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCg > 2:73822/1‑149 (MQ=255) aTGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCgg < 3:281723/149‑1 (MQ=255) aCTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTc > 7:260097/1‑148 (MQ=255) aCTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTc > 7:107750/1‑148 (MQ=255) aCTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATAGTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTcc > 8:197537/1‑149 (MQ=255) tGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCg < 3:273185/106‑1 (MQ=255) tGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCg > 4:273185/1‑106 (MQ=255) tGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGcc > 1:147829/1‑149 (MQ=255) tGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGcc > 7:299302/1‑149 (MQ=255) ggCGACACGCCGAAGTGGCTGTACAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCt < 2:4120/85‑1 (MQ=255) gCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGc < 4:326229/149‑1 (MQ=255) gACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGcac < 8:107750/149‑1 (MQ=255) cGCCGAAGTGGCTGTAGAACTCGCTGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACg < 5:334952/149‑1 (MQ=255) ccGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCAAGt > 1:270950/1‑148 (MQ=255) gAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTc > 7:142299/1‑147 (MQ=255) gAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCaa < 1:296917/149‑1 (MQ=255) cTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCtt < 1:256517/149‑1 (MQ=255) tGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGatcatc > 6:329756/1‑116 (MQ=255) tGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGatcatc < 5:329756/116‑1 (MQ=255) tGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTg > 4:284769/1‑149 (MQ=255) gTAGAACTCGCGGTCCTCCGTTGACACCAAGGTTTAGAGCAGATATTTGGGTACCTGATCGATATTGATAAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGATCCAGCCGCACAACGTCAAGCTCCtttc > 7:255004/1‑147 (MQ=255) aGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGAACCACGTCAAGCGCCTTGCCg > 7:2010/1‑149 (MQ=255) aaCTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGtt > 3:288199/1‑149 (MQ=255) gTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCgg < 8:260097/149‑1 (MQ=255) ctccGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGaa < 4:200285/148‑1 (MQ=255) ccGTAGCCACCCAGCTTTCGAGCAGATATTTCGGTACCGGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAgg < 4:236889/149‑1 (MQ=255) cGTTGCCACCAAGGTTTCGATCATATATTTGGTTACCTGATCGATCTTGATCAGGATGCGTTCTTCGAGATTTTTCGTGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTTCCGGTGCCAACGGCAAgg < 8:255004/148‑1 (MQ=255) cGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAgg < 5:122104/148‑1 (MQ=255) ttGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGTAAAGGccc < 4:394162/149‑1 (MQ=255) gCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCg < 2:147829/148‑1 (MQ=255) caccaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCaa < 2:110341/149‑1 (MQ=255) accaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGc > 4:394977/1‑102 (MQ=255) accaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGc < 3:394977/102‑1 (MQ=255) accaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAAc > 6:240360/1‑149 (MQ=255) accaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAAc < 1:90437/149‑1 (MQ=255) ccaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACg < 8:299302/149‑1 (MQ=255) ccaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACg > 3:163573/1‑149 (MQ=255) ccaAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACg > 4:169624/1‑149 (MQ=255) caAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACg > 1:107485/1‑148 (MQ=255) gTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATc < 4:163573/149‑1 (MQ=255) gAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGc > 3:401864/1‑146 (MQ=255) gAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGc > 4:36814/1‑146 (MQ=255) gAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCa < 3:284769/148‑1 (MQ=255) gCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAg > 7:373921/1‑127 (MQ=255) gCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAg < 8:373921/127‑1 (MQ=255) aGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGaa < 4:337748/149‑1 (MQ=255) tACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAAc < 6:240665/123‑1 (MQ=255) tccTGATCAAGATCGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGAc > 2:19264/2‑149 (MQ=255) atcgatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGaa < 7:146390/147‑1 (MQ=255) atcgatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACt > 2:219787/1‑149 (MQ=255) cgatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGtggt > 4:319461/1‑93 (MQ=255) cgatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGtggt < 3:319461/96‑4 (MQ=255) cgatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAAACGCCAGAGAAGCGCACGCGGACGAACTgc > 4:352675/1‑149 (MQ=255) gatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTgcg > 5:330746/1‑149 (MQ=255) gatcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTgc < 3:36814/148‑1 (MQ=255) atcTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTgcgc > 7:236172/1‑149 (MQ=255) | TACTGCCACCCTGGCGCATCGAGCCGGACGACGTGTTGACCCACATGGCCCGGACGATGGACTTTGGCGACACGCCGAAGTGGCTGTAGAACTCGCGGTCCTCCGTTGCCACCAAGGTTTCGAGCAGATATTTGGGTACCTGATCGATCTTGATCAGGATGCGGTCTTCGAGATTTTTCGGGTAGATGCCGCCGATCATCAGCGGCTCCAGCCGCACCACGTCAAGCGCCTTGCCGTTGGCACCGGAAAGGCCCGCAACGTAATCGCCAGAGAAGCGCACGCGGACGAACTGCGC > NC_002947/5322588‑5322882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |