| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,323,124 | A→C | 5.3% | L43R (CTC→CGC) | mrcB ← | transglycosylase/transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,323,124 | 0 | A | C | 5.3% | 269.5 / 2.2 | 84 | L43R (CTC→CGC) | mrcB | transglycosylase/transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (38/41); new base C (3/2); total (41/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGGTAGCCGAGCGCATCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGC > NC_002947/5322982‑5323268 | aCGGTAGCCGAGCGCATCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTaaa < 8:363118/149‑1 (MQ=255) ccGAGCGCATCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGaa < 5:330400/149‑1 (MQ=255) ccccattaTCTAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACcgcg < 1:348508/139‑1 (MQ=255) aTCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCaa > 4:41431/1‑149 (MQ=255) aTCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCaa > 5:162631/1‑149 (MQ=255) aTCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCaa > 5:412471/1‑149 (MQ=255) gAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCTTCGCGGTTTACCTCGATGCCgtcgtcca < 7:220017/149‑8 (MQ=255) gCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACcgcg > 2:348508/1‑134 (MQ=255) gAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCaa > 6:338737/1‑149 (MQ=255) gAAGTCGTGCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACTGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCaa < 7:129252/149‑1 (MQ=255) aaGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAAc < 4:62988/149‑1 (MQ=255) aGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAAc > 6:111740/1‑148 (MQ=255) aGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAAc > 6:154030/1‑148 (MQ=255) gTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGc > 3:56789/1‑149 (MQ=255) cTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTg < 7:283766/148‑1 (MQ=255) cTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt > 8:258122/1‑149 (MQ=255) cTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt > 8:170452/1‑149 (MQ=255) tCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt > 8:332094/1‑148 (MQ=255) tCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt > 1:16129/1‑148 (MQ=255) tCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTc > 4:272176/1‑149 (MQ=255) tCAACTTCTGGCCGGTGAACAGCTCCAGCGATCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCtt > 1:243751/1‑148 (MQ=255) tCAAATTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTGCAGCGGTTGCCGGAGAACTTTTCCGGGACGACAGCTTCGCGTTTAACCGCGCACCCGGCGACGATCACCAGGCCAGCCAGGCTgcgcgt > 6:327568/1‑146 (MQ=255) aaCTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCAc < 8:89840/125‑1 (MQ=255) aaCTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCAc > 7:89840/1‑125 (MQ=255) cTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcc < 5:317850/148‑1 (MQ=255) gCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagc > 4:209194/1‑149 (MQ=255) gCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagccca < 6:41951/147‑1 (MQ=255) cGGTGCACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCACCGATCACCAGGCCAACCAGCCAGAGCTTCAAcgcccagcc > 2:86583/1‑148 (MQ=255) cGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAagcccagcc > 3:181976/1‑148 (MQ=255) ggTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAgcccagccca < 5:405875/149‑1 (MQ=255) gTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGcccagcccag > 3:147204/1‑149 (MQ=255) cTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGgc‑gc < 4:147204/149‑1 (MQ=255) cAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGc‑gcg < 3:199471/147‑1 (MQ=255) cAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCgg < 5:61292/148‑1 (MQ=255) cAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCgg < 4:181976/148‑1 (MQ=255) cAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCgg < 6:412471/148‑1 (MQ=255) gTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCgg < 2:238902/149‑1 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGc < 3:272176/149‑1 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGc > 2:364542/1‑149 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGc < 6:162631/149‑1 (MQ=255) tCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGc < 7:170452/149‑1 (MQ=255) gggCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCg > 8:125376/1‑149 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGTCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCg > 3:165360/1‑149 (MQ=255) aTACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCg > 4:301207/1‑149 (MQ=255) tACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCgg < 5:154030/149‑1 (MQ=255) tACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCgg < 2:243751/149‑1 (MQ=255) acacTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCggg > 8:144211/1‑149 (MQ=255) acTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCg > 7:361852/1‑149 (MQ=255) tGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGttt < 3:209194/148‑1 (MQ=255) gggATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAgg > 5:51661/1‑149 (MQ=255) ggATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAggg < 3:301207/149‑1 (MQ=255) ggATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAggg > 8:125232/1‑149 (MQ=255) aTGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGt < 3:41431/149‑1 (MQ=255) aTGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGAGAGCGGCCGGTCGGGCGTTTCTGAGGGGt < 3:181187/149‑1 (MQ=255) ggTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGc > 2:329150/1‑149 (MQ=255) cAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGc < 3:110480/73‑1 (MQ=255) gCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgg < 8:381855/148‑1 (MQ=255) gCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgg < 5:111740/148‑1 (MQ=255) gCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcg < 7:332094/147‑1 (MQ=255) gCCGGAGAACTGTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgg < 8:269054/148‑1 (MQ=255) ccGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcggg < 1:161810/148‑1 (MQ=255) cGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCATCAAAGCCCAGCCCAGCAAAGCGGCGGGACCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggt > 1:131354/1‑149 (MQ=255) agaACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GGGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcgg < 5:338737/149‑1 (MQ=255) gaACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcggg > 1:190714/1‑149 (MQ=255) gaACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcggg > 7:9595/1‑149 (MQ=255) gaACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcgg < 1:364542/148‑1 (MQ=255) aCTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCTAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTc < 7:258122/149‑1 (MQ=255) aCTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTc < 7:144211/149‑1 (MQ=255) ttttCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCAt > 5:186327/1‑149 (MQ=255) ttttCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCAt > 2:119147/1‑149 (MQ=255) tttCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATg > 4:312380/1‑149 (MQ=255) tttCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATg > 7:107970/1‑149 (MQ=255) cTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTGAGGTTCGGGTCATggcgg > 1:138990/1‑149 (MQ=255) ggACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCggg > 5:186998/1‑123 (MQ=255) ggACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCggg < 6:186998/123‑1 (MQ=255) gacgacGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGgcggcg < 2:354000/148‑1 (MQ=255) gacgacGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGcggcgg < 3:312380/149‑1 (MQ=255) acgacgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGa < 7:125232/149‑1 (MQ=255) gacgGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGAtt < 1:119147/149‑1 (MQ=255) ccgGCTTCGCGGTTTACCTCGATGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcggg < 5:217062/132‑1 (MQ=255) ccgGCTTCGCGGTTTACCTCGATGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATttcgggttcggg > 6:217062/2‑133 (MQ=255) ccgGCTTCGCGGTTTACCTCGATGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGAGGGGAGTTCGGGTTCGGGTCATGGCGGCGGATta > 8:351027/2‑149 (MQ=255) cATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACg < 4:165360/149‑1 (MQ=255) aTCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGc > 7:68115/1‑149 (MQ=255) | ACGGTAGCCGAGCGCATCGAGCTCGGTGAGGAAGTCGTTCTTGCTCAACTTCTGGCCGGTGAACAGCTCCAGCGGTCGGGCATACACTTTGGCCGGGATGGTCCAGCGCTTGCCGGAGAACTTTTCCTGGACGACGGCATCGAGGTAAACCGCGAAGCCGGCAACGATCACCAGGCCAACCAGGCTGAGCTTCAAAGCCCAGCCCAGCCAGGC‑GCGGGAGCGGCCGGTCGGGCGTTTCTGAGGGGTGCGGGGATTTCGGGTTCGGGTCATGGCGGCGGATTATACGC > NC_002947/5322982‑5323268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |