| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,324,153 | T→C | 6.6% | C263R (TGC→CGC) | PP_4684 → | kinase‑like domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,324,153 | 0 | T | C | 6.6% | 265.7 / 5.6 | 90 | C263R (TGC→CGC) | PP_4684 | kinase‑like domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (36/48); new base C (2/4); total (38/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTCAGCATGCCGGCCGACGCTGATGGCG > NC_002947/5324008‑5324297 | tGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGCG‑cc > 6:348072/1‑149 (MQ=255) aCATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTg < 8:273706/149‑1 (MQ=255) cATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTgg < 4:377469/149‑1 (MQ=255) aTCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCGGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGc > 1:333072/1‑149 (MQ=255) tCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGcc > 4:315762/1‑149 (MQ=255) ccACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGccc > 1:297706/1‑149 (MQ=255) cTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGgcg < 4:373903/149‑1 (MQ=255) ggCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCt < 4:285658/148‑1 (MQ=255) gCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCtt > 3:320719/1‑148 (MQ=255) cAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATTGACCTGGAAGACCGCGGCCTGAAGCG‑CCGTGCCAGGCACTtca < 3:180211/149‑1 (MQ=255) aaCGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGCG‑CCGGGCCAGGCACTtcag < 5:348072/149‑2 (MQ=255) aCGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTtcatc < 7:331322/149‑1 (MQ=255) aCGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGCG‑CCGGGCCAGGCACTtcagg < 3:71720/149‑3 (MQ=255) cGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTtcatca < 4:382660/149‑1 (MQ=255) ccACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGc < 8:387437/149‑1 (MQ=255) ccACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGc < 5:235457/149‑1 (MQ=255) ccACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGc > 1:128056/1‑149 (MQ=255) ccACCTTGATCGATGACAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAga > 5:315476/1‑148 (MQ=255) cACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGcc < 2:333072/149‑1 (MQ=255) cTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑Gt < 6:355473/149‑1 (MQ=255) aTCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTAcc < 7:46493/148‑1 (MQ=255) tCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTg < 8:292299/149‑1 (MQ=255) cGATGGCAAGGTGGTGACCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGc < 7:365147/139‑1 (MQ=255) cGATGGCAAGGTGGTGACCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGc > 8:365147/1‑139 (MQ=255) gatggaaGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGaa < 5:353825/144‑1 (MQ=255) aTGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGaa < 2:1704/149‑1 (MQ=255) aGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACg < 7:340085/149‑1 (MQ=255) ggtggtGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACgg < 4:102623/149‑1 (MQ=255) tggtgATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACgggg < 5:330552/149‑1 (MQ=255) gtgATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTGCCCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACgggg < 1:78039/148‑1 (MQ=255) gtgATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCAATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCACCGCGCTTCATCACCCA‑GTACCTGGAACTGACCGGGGa > 6:118865/1‑149 (MQ=255) cTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCt > 3:118809/1‑113 (MQ=255) cTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCt < 4:118809/113‑1 (MQ=255) ttCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCATTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACg > 6:84081/1‑148 (MQ=255) gATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAg < 3:315762/148‑1 (MQ=255) tCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGc > 1:267351/1‑143 (MQ=255) tCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGc < 2:267351/143‑1 (MQ=255) tCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGaa > 8:217645/1‑149 (MQ=255) gTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGaa < 8:356702/145‑1 (MQ=255) gTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGaa > 7:356702/1‑145 (MQ=255) gTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGc < 2:128056/149‑1 (MQ=255) cAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTAGGAAGGCCTGGAACTGCTc > 6:294101/1‑148 (MQ=255) aaCGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCa > 4:149705/1‑148 (MQ=255) aCGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAAc < 4:215763/149‑1 (MQ=255) cGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACt > 2:302972/1‑149 (MQ=255) cGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCATGGAACTGCTCAACt > 7:173800/1‑149 (MQ=255) aGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTc < 3:149705/149‑1 (MQ=255) ccTTTCAGAATGACCGACGACTACGCCGACACCGCCTTCCTGCCCATGGACCTGGAAGACCGCGGCCTGAAGTC‑CCTGCCCCCGCGCTGCATCAGCCA‑GTACCTCGAACTGAAGGGGAATTACGAAGGCCTGGAACTGCTCAACTTCTa > 8:277515/1‑149 (MQ=255) cTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTAc < 2:14262/149‑1 (MQ=255) ccGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACaaa < 6:66257/148‑1 (MQ=255) aCCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACaaa > 1:271684/1‑141 (MQ=255) aCCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACaaa < 2:271684/141‑1 (MQ=255) aCCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTAcc < 5:84081/148‑1 (MQ=255) ccGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACcgc < 2:126542/149‑1 (MQ=255) cGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACggg < 1:372059/102‑1 (MQ=255) cGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACggg > 2:372059/1‑102 (MQ=255) gTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCCACTTCTACAACGCCTACCGCGCGCt > 7:271492/1‑149 (MQ=255) gCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACg > 5:71589/1‑149 (MQ=255) gCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACg > 6:317966/1‑149 (MQ=255) gCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACg > 4:270540/1‑149 (MQ=255) ccGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACgg > 1:295480/1‑149 (MQ=255) acacCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGcc < 4:320719/149‑1 (MQ=255) acCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGTGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGt < 6:2166/140‑1 (MQ=255) acCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGt > 5:2166/1‑140 (MQ=255) acCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGcc > 3:313344/1‑147 (MQ=255) cGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAgg < 5:263306/149‑1 (MQ=255) gCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTAc < 8:118823/139‑1 (MQ=255) gCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTAc > 7:118823/1‑139 (MQ=255) ccTGCCGGGCCATGGACCTGGACGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGACGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTc < 8:271492/149‑1 (MQ=255) ccTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTa < 5:358220/120‑1 (MQ=255) ccTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTa > 6:358220/1‑120 (MQ=255) ccTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCAt > 2:131775/1‑149 (MQ=255) tGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACg < 1:253020/133‑1 (MQ=255) tGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACg > 2:253020/1‑133 (MQ=255) tGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTg > 6:398887/1‑149 (MQ=255) gCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGtt < 5:317966/149‑1 (MQ=255) ccATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTc < 6:71589/149‑1 (MQ=255) aTGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTAc > 4:20202/1‑127 (MQ=255) aTGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTAc < 3:20202/127‑1 (MQ=255) tGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCGGGCGCTTCATCAGGCA‑GTACCTGGAACTGACGTGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTCAGc < 7:277515/149‑1 (MQ=255) tGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTCAGc < 7:217645/149‑1 (MQ=255) ccTGGAAGACCGCGGCGTGAAGTG‑CCTGGCTCGGCGCTTCTTCAGCCA‑GTACCTGGTACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACATAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTCAGCAtac < 5:118865/149‑3 (MQ=255) gtaGACCGCGGCCTGAAGTG‑CCTGTCCCGGCGCTTCATCAGCCA‑GTAGCTTGAAGTGAGGGTGGATTTCTAAGGCCTTGTACTGCTCAACTTCTACAAAGCGTACGGATCGCTCGTACGGGACAAGTTCGCTTTGTTc < 6:402813/136‑1 (MQ=255) gAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAACGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTc > 5:402813/1‑138 (MQ=255) gAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTCAGCATgccg < 2:297706/147‑1 (MQ=255) gcgGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGCGAATAAGAAGGGCAGGAACTGCTGAACGTCTACAAAGCCTACCGCCCCCAAGTACGGGCCAAGGTCGGATTGGTCAGCAATCCCGCCCACGca > 1:111591/1‑148 (MQ=255) gatGAAGCG‑CCGGGCCAGGCACTTCATCAGCCAGGTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTc > 1:253850/3‑128 (MQ=255) gatGAAGCG‑CCGGGCCAGGCACTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTc < 2:253850/125‑1 (MQ=255) tGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCACATTGTTCAGCATGCCGGCCGACGCTGATGGc > 3:399850/1‑149 (MQ=255) aaGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCGCGTACGGGCCAAGGTCGCATTGTTCAGCATGCCGGCCGACGCTGATGGCg < 3:270540/148‑1 (MQ=255) | TGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAGCCTTTCCGACTGACCGACGTCTACGCCGACACCGCCTTCCTGGCCATGGACCTGGAAGACCGCGGCCTGAAGTG‑CCTGGCCCGGCGCTTCATCAGCCA‑GTACCTGGAACTGACGGGGGATTACGAAGGCCTGGAACTGCTCAACTTCTACAAAGCCTACCGCGCGCTCGTACGGGCCAAGGTCGCATTGTTCAGCATGCCGGCCGACGCTGATGGCG > NC_002947/5324008‑5324297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |