| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,341,584 | G→T | 7.5% | V231L (GTG→TTG) ‡ | panB → | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,341,584 | 0 | G | T | 7.5% | 242.1 / 7.1 | 78 | V231L (GTG→TTG) ‡ | panB | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (35/37); new base T (4/2); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
CGTACCCAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACTGCGCG > NC_002947/5341439‑5341724 | cGTACCCAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTga < 7:120977/149‑1 (MQ=255)cGTACCCAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTg < 6:261849/148‑1 (MQ=255) gTACCCAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTgaa < 3:198087/149‑1 (MQ=255) gTACCCAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTg > 3:192557/1‑147 (MQ=255) cAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGTTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACt < 1:273946/149‑1 (MQ=255) cAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACt < 3:159263/149‑1 (MQ=255) cAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACt > 4:170194/1‑149 (MQ=255) gCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGTGGCCGGGTACCGAAGTTCGTGAAGAACTTc < 3:320076/149‑1 (MQ=255) cGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCa > 7:277672/1‑149 (MQ=255) cGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCa < 3:136348/149‑1 (MQ=255) cGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCAGCCGGGTACCGAAGTTCg < 2:68390/137‑1 (MQ=255) cGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCAGCCGGGTACCGAAGTTCg > 1:68390/1‑137 (MQ=255) cTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCTTCACGAACTTcggtac < 3:30658/149‑6 (MQ=255) tGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑Ag > 2:176913/1‑149 (MQ=255) tGGCGGCGGAAATAACCAATCCCGTTGGAATACCGGTAAACGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCCGACTGTCGCTGAGCGGCCGGGTACCGAAGTTCTTGAACAACTTCA‑TGC‑Ag > 5:152575/1‑149 (MQ=255) gcggcgGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑Aggg < 4:192557/149‑1 (MQ=255) gcggcgGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑Agg < 5:313556/148‑1 (MQ=255) gcggcgGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑Agg < 1:18608/148‑1 (MQ=255) ggcggAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGc > 2:109543/1‑148 (MQ=255) ggcggAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGc > 2:203767/1‑148 (MQ=255) aaaTCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGATAGTGAAGAACATCA‑TGC‑AGGGCCAACCg > 2:177498/1‑149 (MQ=255) tCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGa > 6:27816/1‑148 (MQ=255) cACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCTTCACGAACTTcggt < 4:322952/133‑4 (MQ=255) cACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCTTCACGAACTTcggt > 3:322952/1‑130 (MQ=255) cACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTga > 2:348505/1‑122 (MQ=255) cACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGCACTTCA‑TGC‑AGGGCCAACCGGata > 4:301295/1‑149 (MQ=255) aCCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTgaa < 5:206747/122‑1 (MQ=255) aCCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTgaa > 6:206747/1‑122 (MQ=255) aaTGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCa > 1:302534/1‑149 (MQ=255) tGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATa < 2:20198/149‑1 (MQ=255) gCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCt < 5:389893/148‑1 (MQ=255) gCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCt > 6:389893/1‑148 (MQ=255) aTCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCtcgt > 6:380115/1‑149 (MQ=255) ggCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑c > 3:174437/1‑147 (MQ=255) ggCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGAAATCCATAGCGCCCTCGTCGCTTACGT‑c > 8:385886/1‑147 (MQ=255) gCATTGCCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAg < 8:355243/149‑1 (MQ=255) ttGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCg < 1:109543/149‑1 (MQ=255) gggcCGGCATCGCAACCGA‑GGCCACGGTAGT‑GGTACCGAACCACTTGCTCGGCCTGTCGCTCAGGGGCGGGGTACTTAAGTTCGTCAATAACTTAA‑TGC‑TGGTCAAACCGTATATCCATAGCGCCCTCGTCGCTTAGGG‑CGTGGCGGTc < 2:182402/147‑1 (MQ=255) cGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagc < 1:133321/149‑1 (MQ=255) gCAGCGCCACCGATGGCCA‑GGTACTGGGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagc > 1:4035/1‑148 (MQ=255) gCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagcaa < 7:385886/149‑1 (MQ=255) gCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagcaa < 3:3803/149‑1 (MQ=255) gCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagcaa < 1:203767/149‑1 (MQ=255) gcgcCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTc < 4:174437/149‑1 (MQ=255) gcCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAg > 3:178922/1‑149 (MQ=255) ccACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGt > 2:78831/1‑149 (MQ=255) aCCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGttt > 7:171139/1‑149 (MQ=255) gCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAgg < 3:170194/148‑1 (MQ=255) cA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAg > 6:272808/1‑149 (MQ=255) a‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGc > 3:60602/1‑149 (MQ=255) gtacttCACGACATTCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCTGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAacac < 6:152575/147‑1 (MQ=255) gtactgCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACgg < 5:27816/149‑1 (MQ=255) tgCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCAGGGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGtt > 1:320065/1‑149 (MQ=255) tgCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGtt > 8:324962/1‑148 (MQ=255) cACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCa < 1:78831/148‑1 (MQ=255) cACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAg > 1:75480/1‑149 (MQ=255) cACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAg > 7:173027/1‑149 (MQ=255) cACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAAGCGGTCAAGCAAGTCAGTTTCCCa < 2:169554/129‑1 (MQ=255) cACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAAGCGGTCAAGCAAGTCAGTTTCCCa > 1:169554/1‑129 (MQ=255) aCGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGt < 1:177498/149‑1 (MQ=255) gACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGAGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTg > 7:258452/1‑148 (MQ=255) cATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCAt < 5:272808/149‑1 (MQ=255) tGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGCGAGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCAt > 1:105633/1‑148 (MQ=255) cTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAAt < 8:277672/149‑1 (MQ=255) tCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGt > 1:133051/1‑91 (MQ=255) tCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGt < 2:133051/91‑1 (MQ=255) tCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagcaa < 2:340517/107‑1 (MQ=255) tCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTcaagcaa > 1:340517/1‑107 (MQ=255) tGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTc > 5:55841/1‑148 (MQ=255) gTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTc > 2:363558/1‑147 (MQ=255) tCGCTGGGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCaa < 7:309425/148‑1 (MQ=255) gCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGAc > 7:209506/1‑149 (MQ=255) tGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCg > 5:207315/1‑149 (MQ=255) gggTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAAc < 1:176913/149‑1 (MQ=255) ggTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACt < 4:60602/149‑1 (MQ=255) ccGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACTgcgc < 6:55841/149‑1 (MQ=255) atgAAGTTCTTCACGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGTGGGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACTgcg > 1:120955/3‑149 (MQ=255) atgAAGTTCTTCACGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACTgcgc > 5:128372/3‑149 (MQ=255) acGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCTGGCAGGGAACTCGGGTTCAGTGGATGAATACAGTCAAGACCGTCCGCGAACTgcgc < 5:6682/148‑1 (MQ=255) cGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACTgcgcg < 4:178922/149‑1 (MQ=255) | CGTACCCAGCGAACTGGCGGCGGAAATCACCAATGCCGTTGGCATCCCGGTAATCGGCATTGGCGCCGGCAGCGCCACCGATGGCCA‑GGTACT‑GGTACTGCACGACATGCTCGGCCTGTCGCTGAGCGGCCGGGTACCGAAGTTCGTGAAGAACTTCA‑TGC‑AGGGCCAACCGGATATCCATAGCGCCCTCGTCGCTTACGT‑CGAGGCGGTCAAGCAAGTCAGTTTCCCAGGCAGCGAACACGGGTTCAGTGCATGAATACAGTCAAGACCGTCCGCGAACTGCGCG > NC_002947/5341439‑5341724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |