| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,359,353 | G→C | 5.3% | A306G (GCC→GGC) | nusA ← | transcription termination/antitermination factor L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,359,353 | 0 | G | C | 5.3% | 316.9 / 6.1 | 95 | A306G (GCC→GGC) | nusA | transcription termination/antitermination factor L |
| Reads supporting (aligned to +/- strand): ref base G (43/47); new base C (3/2); total (46/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
ACCGGTTTCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACC > NC_002947/5359205‑5359498 | aCCGGTTTCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatgg > 1:368362/1‑149 (MQ=255)aCCGGTTTCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatgg > 3:56686/1‑149 (MQ=255)aCCGGTTTCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatgg > 7:149130/1‑149 (MQ=255) gTTTCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatggcatg > 4:265743/1‑149 (MQ=255) tttCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatggcatgg < 4:333476/149‑1 (MQ=255) ttCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATggg > 1:214570/1‑149 (MQ=255) cGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGc < 7:316402/148‑1 (MQ=255) ccTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCt > 2:222187/1‑149 (MQ=255) cTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCtt < 6:155422/149‑1 (MQ=255) tGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGCCCATGCCATGGACATc < 8:237859/146‑1 (MQ=255) ttGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTtc < 4:207833/147‑1 (MQ=255) cTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCaa < 1:261951/149‑1 (MQ=255) ttGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATAAAc > 7:137910/1‑149 (MQ=255) tGGCCGGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAAc > 7:369605/1‑148 (MQ=255) gCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACga < 1:222187/148‑1 (MQ=255) ggATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATc > 7:152769/1‑149 (MQ=255) ggATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATc > 2:140415/1‑149 (MQ=255) gTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATcgccg > 1:257679/1‑149 (MQ=255) tCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATTATcgccgc < 2:368362/149‑1 (MQ=255) ccTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATcgccggc > 5:10310/1‑147 (MQ=255) ctcGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACtt > 5:388121/1‑149 (MQ=255) ctcGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACtt > 2:363250/1‑149 (MQ=255) tcGGTCCTCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACtt > 6:43698/1‑148 (MQ=255) gTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGc < 3:285340/149‑1 (MQ=255) tcatcaCGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGcc < 8:149130/149‑1 (MQ=255) atcaCGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCgg > 3:298156/1‑149 (MQ=255) tcaCGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGc > 7:223064/1‑149 (MQ=255) tcaCGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGc > 1:3118/1‑149 (MQ=255) aCGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGa < 1:40606/149‑1 (MQ=255) gTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACa > 6:314215/1‑149 (MQ=255) gTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACa > 7:23762/1‑149 (MQ=255) tCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGCCCATGCCATGGACATcg < 2:355532/110‑2 (MQ=255) tCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGCCCATGCCATGGACATcg > 1:355532/1‑109 (MQ=255) aGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGc < 4:386351/149‑1 (MQ=255) gggTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatggcat > 3:117416/1‑99 (MQ=255) gggTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCcatggcat < 4:117416/99‑1 (MQ=255) gggTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCg > 3:160538/1‑149 (MQ=255) tCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTtg < 8:352552/149‑1 (MQ=255) accAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACAGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGtt > 7:7392/2‑148 (MQ=255) cAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGTCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCTCGACTTCAGGCGGCGACATGGCGTtga < 6:185127/148‑1 (MQ=255) cAGCCGATCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTtgat < 1:140415/149‑1 (MQ=255) gCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTtgatga < 8:369605/149‑1 (MQ=255) cGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGAc > 6:233131/1‑148 (MQ=255) ggTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACg > 7:202411/1‑148 (MQ=255) gTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCCCGACTTCAGCCGGCGACATGGCGTTGATGACGaa > 3:120990/1‑149 (MQ=255) cAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACt > 1:241466/1‑149 (MQ=255) actgactgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTCTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTgc < 6:161677/149‑1 (MQ=255) cattgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGcc > 1:151759/4‑149 (MQ=255) actgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACTAACTgc < 8:85812/145‑1 (MQ=255) actgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTgcgc < 8:152769/147‑1 (MQ=255) actgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTgc > 7:85812/1‑145 (MQ=255) tgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCggg > 5:250006/1‑149 (MQ=255) tgGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCggg > 5:288663/1‑149 (MQ=255) ggCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGt > 1:132244/1‑149 (MQ=255) gCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCggg < 2:257679/147‑1 (MQ=255) ccAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTa > 1:321887/1‑149 (MQ=255) ccAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTa < 1:363250/149‑1 (MQ=255) cAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTtgat < 7:152321/129‑1 (MQ=255) cAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTtgat > 8:152321/1‑129 (MQ=255) aGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATc < 4:56686/149‑1 (MQ=255) cGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTc < 6:288663/149‑1 (MQ=255) gAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTcc < 7:181282/149‑1 (MQ=255) gAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTcc > 6:328286/1‑149 (MQ=255) cTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGa > 2:24133/1‑149 (MQ=255) aCCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGAc < 8:180935/147‑1 (MQ=255) aCCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGAc < 4:329041/147‑1 (MQ=255) aCCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACg < 4:120990/148‑1 (MQ=255) aCCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACg < 4:20212/148‑1 (MQ=255) ccGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGat < 2:132244/149‑1 (MQ=255) cGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGata < 8:223064/149‑1 (MQ=255) cGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGata < 2:241466/149‑1 (MQ=255) cGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGGCCCAAAGGACGata < 3:244223/149‑1 (MQ=255) gCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCTTTGGGACGataa < 4:218776/149‑2 (MQ=255) aCGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCca > 6:90522/1‑149 (MQ=255) cGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCcac < 2:321887/149‑1 (MQ=255) cGGCAAATCGCCTGGCCCAGCTAGTCCTCGTAGACCGCCATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCCAGACTTCAGCAGCCGACATGGAGTTGATGACGAACTCCGACGTGTTATAGTCACAAAGCACGATATCca > 4:115804/1‑148 (MQ=255) gCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCacac < 5:233131/149‑1 (MQ=255) cAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACg > 4:222871/1‑148 (MQ=255) aTGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTc < 5:43698/149‑1 (MQ=255) aTGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTc < 5:314215/149‑1 (MQ=255) gCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTcac < 8:23762/148‑1 (MQ=255) ccTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTcacca > 8:342873/1‑149 (MQ=255) ccTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGAGATCCAGACGCTcacca > 8:126119/1‑149 (MQ=255) ggCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCaccacc > 1:378091/1‑147 (MQ=255) ggCCAGGGTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCaccacc < 4:298156/147‑1 (MQ=255) cAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCt < 8:34741/149‑1 (MQ=255) gTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTccc < 2:378091/149‑1 (MQ=255) ttGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTcccc > 1:148352/1‑149 (MQ=255) ggcgacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACg < 3:265743/148‑1 (MQ=255) cgacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGcc < 5:328286/149‑1 (MQ=255) cgacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGcc < 2:148352/149‑1 (MQ=255) gacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCca > 8:81514/1‑116 (MQ=255) gacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCca < 7:81514/116‑1 (MQ=255) gacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCt > 6:350695/1‑149 (MQ=255) gacggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCt < 6:63399/149‑1 (MQ=255) atgaagaTGCCCATGCCATGGACATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTg > 5:340425/6‑149 (MQ=255) tCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGAcgcgcg < 2:3118/148‑1 (MQ=255) catggcatggGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAAc > 6:232007/1‑149 (MQ=255) atggcatggGCATCTTCATCAACGATGATCGCCGCTACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAAcc < 7:386663/149‑1 (MQ=255) atggcatggGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAAc > 1:367811/1‑148 (MQ=255) | ACCGGTTTCGGCCTGTTGCTTGGCCTGGATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACC > NC_002947/5359205‑5359498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |