| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,360,631 | C→A | 5.3% | E70* (GAA→TAA) ‡ | rimP ← | ribosome maturation factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,360,631 | 0 | C | A | 5.3% | 307.8 / 5.5 | 95 | E70* (GAA→TAA) ‡ | rimP | ribosome maturation factor |
| Reads supporting (aligned to +/- strand): ref base C (40/50); new base A (2/3); total (42/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.40e-01 | |||||||||||
TTCACTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCT > NC_002947/5360486‑5360777 | ttCACTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCa < 7:4313/149‑1 (MQ=255) tCACTTGTTCGACGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACAACTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGATTCGCAg > 6:392679/1‑149 (MQ=255) cACTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGc < 5:149718/146‑1 (MQ=255) aCTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAgtc > 2:326360/1‑149 (MQ=255) cTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTGATTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAgtc < 1:319622/149‑1 (MQ=255) cTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAgtcg > 2:325745/1‑149 (MQ=255) gTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAgtcgtc < 2:151865/148‑1 (MQ=255) gTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCGAAGCAgtcagc < 8:94753/148‑4 (MQ=255) cGCCAGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAgtc < 1:264571/142‑1 (MQ=255) cGCCAGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAgtc > 2:264571/1‑142 (MQ=255) gCCGGCATTCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGTCTGACTGCTTCGCAGTCGTccacca < 5:211464/149‑1 (MQ=255) gCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTccacca < 2:258649/149‑1 (MQ=255) gCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTccacc < 2:229141/148‑1 (MQ=255) gCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTccac > 8:122531/1‑147 (MQ=255) aTGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATAc > 8:97267/1‑149 (MQ=255) aTGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATAc < 3:249922/149‑1 (MQ=255) gCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCGAAGCAgtcagcc < 8:85243/137‑5 (MQ=255) gCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCGAAGCAgtcagcc > 7:85243/1‑133 (MQ=255) cGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGc < 7:21925/149‑1 (MQ=255) gCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGccttc < 7:122531/149‑1 (MQ=255) cAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCGAAGCAgtcagc > 6:335407/1‑127 (MQ=255) cAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCGAAGCAgtcagc < 5:335407/130‑4 (MQ=255) ccaCTGTTCACGCTGGAACAGTGGGCGATCCATGCCTGGAGAAGGCACCTCGAGGCTGTACTCACGG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGccttcct > 5:91502/3‑149 (MQ=255) aaaCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAAt > 7:20259/1‑138 (MQ=255) aaaCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAAt < 8:20259/138‑1 (MQ=255) aaaCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGccttcct < 2:103200/149‑1 (MQ=255) aaaCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGcct < 7:224644/145‑1 (MQ=255) aaaCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGcct > 8:224644/1‑145 (MQ=255) aaCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGccttcctt > 6:261720/1‑149 (MQ=255) aCTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTg < 4:313676/149‑1 (MQ=255) tGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTc < 4:324408/149‑1 (MQ=255) ccAGCTTGAACAGTGGGCGAGCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGACTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGAt < 4:82802/148‑1 (MQ=255) ccAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGAt < 6:179086/148‑1 (MQ=255) aGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTa < 1:326360/149‑1 (MQ=255) aaCAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATgc < 6:411048/148‑1 (MQ=255) aGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATATTCCACATAGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAg > 1:169801/1‑149 (MQ=255) gggCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCa < 5:27034/101‑1 (MQ=255) gggCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCa > 6:27034/1‑101 (MQ=255) gATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGaa < 7:97267/149‑1 (MQ=255) tCCATGCCTGGAGAAGACACCTCGAGGGTTTACTAACTG‑CTGATTGGATCTTACACATCGAGGATTGCGCTTGCCTGACGGCTGACTGCTTCTCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATg < 5:392679/149‑1 (MQ=255) aTGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGt > 3:369399/1‑121 (MQ=255) aTGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGt < 4:369399/121‑1 (MQ=255) tGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTa > 2:394250/1‑149 (MQ=255) tGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTa < 5:261720/149‑1 (MQ=255) ccTGGAGAAGACACCTCGCGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTAc < 4:59687/148‑1 (MQ=255) ccTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTAc < 8:297711/148‑1 (MQ=255) gagaAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCTAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCt < 5:61413/147‑1 (MQ=255) gaagaCACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATg < 1:402797/117‑1 (MQ=255) gaagaCACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATg > 2:402797/1‑117 (MQ=255) aagaCACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTa < 1:15748/140‑1 (MQ=255) aagaCACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTa > 2:15748/1‑140 (MQ=255) gaCACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCATCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAAc < 1:325745/149‑1 (MQ=255) tcacCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACg > 2:292527/2‑149 (MQ=255) acCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTa > 6:130424/1‑149 (MQ=255) acCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTa > 6:185962/1‑149 (MQ=255) cTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAAc < 2:241822/144‑1 (MQ=255) cTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAAc > 1:241822/1‑144 (MQ=255) cTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTAt > 3:313580/1‑148 (MQ=255) cTCGAGGGTGTACTCACTG‑CTGATAGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTAt > 1:408001/1‑148 (MQ=255) ggTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATcc < 5:324924/149‑1 (MQ=255) tCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCa > 4:227493/1‑149 (MQ=255) tCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCa > 6:365845/1‑149 (MQ=255) ctg‑ctgATTGGATCTTCCACATCGTTGATTGCGCTGGGCTGTCGGCTGACTGCTGCGCAGTCGTCCACGAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTAGCTAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTg < 6:91502/149‑1 (MQ=255) tg‑ctgATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGa > 7:184588/1‑149 (MQ=255) gATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGt > 1:162179/1‑125 (MQ=255) gATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGc > 8:68173/1‑149 (MQ=255) aTTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTATCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAg < 1:292527/147‑1 (MQ=255) aTTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGa < 6:291229/144‑1 (MQ=255) aTTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACAGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGa > 5:291229/1‑144 (MQ=255) tGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGcc > 5:356509/1‑147 (MQ=255) tGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTCATAGcca > 6:31435/1‑147 (MQ=255) ggATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCa < 5:271180/148‑1 (MQ=255) gATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGa > 5:393894/1‑149 (MQ=255) ccACATCGAGGATTGCGCTGGCCTTACGGCTGACTGCTTCGCAGTCGTCAACCAGAATACCGCCTTCGTTGTCGATGTATATGAGCAGTACCGAATGCTTAACCTGGGAAACGTATTCGATCCCCCAGCAGTTATAGCTCAGAcca < 2:169801/146‑2 (MQ=255) ccACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGAc < 5:201440/144‑1 (MQ=255) ccACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTc > 8:138465/1‑148 (MQ=255) cacaTCGAGGATTGCGCTGGCCTGACGTCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGa < 2:408001/149‑1 (MQ=255) acaTCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGa > 1:285018/1‑148 (MQ=255) tCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAg < 6:166760/123‑1 (MQ=255) tCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAg > 5:166760/1‑123 (MQ=255) aGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGAt < 2:128641/127‑1 (MQ=255) gATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCggg < 3:227493/148‑1 (MQ=255) gATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTAGCTCCCCCAGCACTGATAGCCCAGACCCTAGACAACCgggg > 6:130139/1‑149 (MQ=255) tccTGACGGCTGAGTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCGTTGTCGATGTAGATGAGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGc < 4:313580/148‑1 (MQ=255) gCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAgg < 7:138465/148‑1 (MQ=255) gCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGc < 5:130424/149‑1 (MQ=255) cTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCt < 5:365845/149‑1 (MQ=255) tGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTg > 7:176031/1‑149 (MQ=255) gACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTg > 5:83305/1‑148 (MQ=255) aCTGCTTCGCAGTCGTCCTCGAGAATAAGTTCTTCCTTGTCGATTTAGATGCGCTGTACTGATTGCTTTCCCTGGGATACGTATTCGATCCCCCAGCACTGATTGCCCAGACCGTCGACATCCGGGGCCAAGAATGCCTGCATCTGTTc < 8:176031/149‑1 (MQ=255) aCTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTc < 5:185962/149‑1 (MQ=255) ttCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCg > 8:27296/1‑119 (MQ=255) ttCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCg < 7:27296/119‑1 (MQ=255) ttCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCt > 2:37316/1‑149 (MQ=255) ttCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCt > 5:358425/1‑149 (MQ=255) | TTCACTTGTTCGCCGGCATGCGAGGCAAACTGTTCCAGCGTGAACAGTGGGCGATCCATGCCTGGAGAAGACACCTCGAGGGTGTACTCACTG‑CTGATTGGATCTTCCACATCGAGGATTGCGCTGGCCTGACGGCTGACTGCTTCGCAGTCGTCCACCAGAATACCGCCTTCCTTGTCGATGTAGATGCGCAGTACCGAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCT > NC_002947/5360486‑5360777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |