| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,420,018 | T→A | 5.5% | intergenic (+2/+70) | PP_4759 → / ← PP_4760 | transcriptional regulator, GntR family/alcohol dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,420,018 | 0 | T | A | 5.5% | 339.2 / 6.6 | 109 | intergenic (+2/+70) | PP_4759/PP_4760 | transcriptional regulator, GntR family/alcohol dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (46/57); new base A (4/2); total (50/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.82e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GGCCAAGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAGTTC > NC_002947/5419872‑5420165 | ggCCAAGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGt < 5:68060/149‑1 (MQ=255) gCCAAGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGt > 3:216294/1‑148 (MQ=255) cAAGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAg > 6:61276/1‑149 (MQ=255) aaGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAgg < 3:123390/149‑1 (MQ=255) aaGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAgg < 1:246786/149‑1 (MQ=255) aaGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAgg < 1:252602/149‑1 (MQ=255) aaGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAgg < 5:281379/149‑1 (MQ=255) aaGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAgg < 3:365156/149‑1 (MQ=255) ggCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAgtg > 3:93338/1‑149 (MQ=255) cgGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCTGACAGTCAGTCCGGCAgtagccg < 6:157325/149‑6 (MQ=255) cgGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGACGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAg < 8:3452/149‑1 (MQ=255) gCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGAc > 2:56313/1‑149 (MQ=255) gCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGAc < 6:140819/149‑1 (MQ=255) gCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGAc < 5:214688/149‑1 (MQ=255) cAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACg < 8:184115/149‑1 (MQ=255) aaGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGa < 4:216294/149‑1 (MQ=255) aaGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGa < 2:295611/149‑1 (MQ=255) gCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGt < 4:93338/149‑1 (MQ=255) aCCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTatat > 3:50290/1‑149 (MQ=255) ccTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATAtt < 6:325557/149‑1 (MQ=255) gtGGCCAAGCTGGAGCATGAGGCGATGCTCAATGCCATCCGCCGACAAGACA‑GGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTg < 5:129937/148‑1 (MQ=255) cTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTg > 5:69154/1‑149 (MQ=255) cTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTg < 3:219570/149‑1 (MQ=255) cTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTg < 8:211216/149‑1 (MQ=255) tGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTgg > 6:144291/1‑149 (MQ=255) ggCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACCGCGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTgg > 1:304628/1‑149 (MQ=255) gCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTgg < 2:236288/147‑1 (MQ=255) gCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGc < 4:292229/148‑1 (MQ=255) gCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGAATATTGGc < 2:194770/148‑1 (MQ=255) ccAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAgg > 3:47698/1‑124 (MQ=255) ccTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAg < 5:144291/149‑1 (MQ=255) tGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAggg > 2:145508/1‑149 (MQ=255) gAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAggg < 6:69154/147‑1 (MQ=255) gCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGACAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGc > 1:63884/1‑149 (MQ=255) tGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGACAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGt < 2:63884/149‑1 (MQ=255) gAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGt > 8:211511/1‑148 (MQ=255) ggCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTa < 4:50290/148‑1 (MQ=255) gCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTaa < 7:186924/115‑1 (MQ=255) gCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTaa > 8:186924/1‑115 (MQ=255) gCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGta < 1:315816/123‑1 (MQ=255) gCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGtt < 1:376057/146‑1 (MQ=255) gCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGtt > 2:376057/1‑146 (MQ=255) tCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCa < 4:124217/149‑1 (MQ=255) cgccgACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCt > 8:29114/1‑148 (MQ=255) gccgACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCa < 7:211511/149‑1 (MQ=255) gccgACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTAGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCa < 4:373446/149‑1 (MQ=255) ccgACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCAc > 2:264447/1‑149 (MQ=255) aGACC‑CGGATGCCGCGCGGGCGGCAGTGTGTCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTa > 3:34462/1‑131 (MQ=255) aGACC‑CGGATGCCGCGCGGGCGGCAGTGTGTCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTa < 4:34462/131‑1 (MQ=255) c‑cGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAg > 3:193242/1‑147 (MQ=255) acactGCCGCCCGCGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGt > 6:299883/5‑148 (MQ=255) ggATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCa < 7:228548/149‑1 (MQ=255) gATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAg > 8:349326/1‑149 (MQ=255) gATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAg < 7:362200/149‑1 (MQ=255) cgcgcgGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAgg > 7:386810/1‑145 (MQ=255) cgagcgggcggCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGAAGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGCTCAgg > 8:327485/4‑145 (MQ=255) gcgcgGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAgg > 2:132772/1‑144 (MQ=255) gcgcgGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAgg > 3:402176/1‑144 (MQ=255) cgggcggCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCtt < 8:386810/149‑1 (MQ=255) gcggcAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGcc < 1:145508/149‑1 (MQ=255) gcggcAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGcc < 4:402176/149‑1 (MQ=255) ggcAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACCTCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCg > 5:417161/1‑148 (MQ=255) tgCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCg < 1:264447/149‑1 (MQ=255) ccTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGt > 7:227477/1‑149 (MQ=255) cTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAgg < 3:242429/80‑1 (MQ=255) cTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAgg > 4:242429/1‑80 (MQ=255) cTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGtt < 7:327485/149‑1 (MQ=255) gCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCt > 1:18677/1‑102 (MQ=255) gCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCt < 2:18677/102‑1 (MQ=255) cACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGc < 1:354989/148‑1 (MQ=255) cTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGccc > 6:8944/1‑102 (MQ=255) cTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCAcc < 3:241034/112‑1 (MQ=255) cTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCAcc > 4:241034/1‑112 (MQ=255) cTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCtctc > 4:288996/1‑149 (MQ=255) cAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATTCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCt < 1:120009/146‑1 (MQ=255) cAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCt > 5:17203/1‑146 (MQ=255) cAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCt > 2:120009/1‑146 (MQ=255) cAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCt < 6:17203/146‑1 (MQ=255) cAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAAc < 5:61276/149‑1 (MQ=255) aGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACg < 2:304628/149‑1 (MQ=255) aGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACg > 8:179829/1‑149 (MQ=255) ctagaCCTGCTACTGCCGGACTGTCTGTGAGGCAGTGTAAGACGACTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCAGTTCTCCAGGTCTGGCAGTTCTTGCCGAAATGCCGGTTg < 6:271101/130‑1 (MQ=255) cGAGACCGGCTACTGCCGGACTGACTGTCACGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCAACCCTGCCGTCACATCTCCAGGTCAGGCAGATCTTGCCGAAATGCGGGtag > 5:271101/1‑130 (MQ=255) cGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTc > 3:369764/1‑149 (MQ=255) cGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTc < 3:253424/149‑1 (MQ=255) ttacaCTGCCTGACAGTCAGTCCGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGctc < 4:245624/124‑1 (MQ=255) cTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTcgac > 7:284038/1‑149 (MQ=255) tGCCTGACAGTCAGTCCGGCAGTGAAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATc > 5:107448/1‑149 (MQ=255) gCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCt > 2:140212/1‑149 (MQ=255) ccGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTg < 5:86767/149‑1 (MQ=255) cGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGc < 3:339857/102‑1 (MQ=255) gactgactGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTc > 5:292833/1‑149 (MQ=255) ctgactgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTc > 6:139532/1‑147 (MQ=255) tgactgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAg > 7:341301/1‑149 (MQ=255) tgactgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAg > 4:252498/1‑149 (MQ=255) ctgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAGTTc < 7:275783/149‑1 (MQ=255) tgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCAGCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAGTTc > 4:168959/1‑148 (MQ=255) tgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAg > 2:342568/1‑77 (MQ=255) tgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAg < 1:342568/77‑1 (MQ=255) tgTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAGTTc > 5:263693/1‑148 (MQ=255) | GGCCAAGCTGGCGCGGCAAGCGTACCTGGCCAACCTGGAGCATGAGGCGATCCTCAATGCCATCCGCCGACAAGACC‑CGGATGCCGCGCGGGCGGCAGTGTGCCTGCACCTGTCCAACAGCCGAGACCGGCTACTGCCGGACTGACTGTCAGGCAGTGTAAGACGAGTATATTGGCGTGCAGGGTGGCCGTTACATCCAGCTACCCTGCCCTCACTTCACCAGGTCAGGCAGATCTTGCCGAAATGCCGGTTGCTCTCCTGGTAACGGAACGCCTCGACGATCTGTTCCAGTTC > NC_002947/5419872‑5420165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |