| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,631,120 | T→C | 7.9% | L217P (CTG→CCG) | putA → | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,631,120 | 0 | T | C | 7.9% | 216.6 / 6.8 | 76 | L217P (CTG→CCG) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (36/34); new base C (3/3); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01 | |||||||||||
CTGCTGCGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTGCCGAAGC > NC_002947/5630978‑5631267 | ctgctgCGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCAGCTTGCCGGTCAg < 4:261368/149‑1 (MQ=255) ctgcGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCAc > 5:89914/1‑149 (MQ=255) ctgcGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCAc > 5:102644/1‑149 (MQ=255) cGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACTCCGCCACCT‑GGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CAt < 4:43248/149‑1 (MQ=255) cGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑Ca < 5:289392/149‑1 (MQ=255) ccccGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCAGCTTGCCGGTCAGc > 6:343583/1‑139 (MQ=255) ccccGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCAGCTTGCCGGTCAGc < 5:343583/139‑1 (MQ=255) cccGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACg > 8:75936/1‑148 (MQ=255) gACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAAc > 6:354642/1‑149 (MQ=255) aaGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGc < 3:210222/149‑1 (MQ=255) cccGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCAcc < 6:89914/149‑1 (MQ=255) cGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCAcctc > 6:319148/1‑149 (MQ=255) gcTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTg > 7:46386/1‑109 (MQ=255) gcTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTg < 8:46386/109‑1 (MQ=255) gATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCAccc > 8:107885/1‑149 (MQ=255) aTCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCAccc < 1:29396/148‑1 (MQ=255) ccGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGc > 4:167678/1‑148 (MQ=255) cgcgACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGca > 6:307865/1‑148 (MQ=255) gcgACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGcat > 3:321611/1‑148 (MQ=255) aGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCgg > 3:119422/1‑148 (MQ=255) aGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGc < 4:321611/149‑1 (MQ=255) gATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGc > 5:395562/1‑148 (MQ=255) aTCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGc > 1:178147/1‑147 (MQ=255) gTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAgc > 8:113262/1‑149 (MQ=255) tACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATaa > 3:57838/1‑102 (MQ=255) tACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATaa < 4:57838/102‑1 (MQ=255) tACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAgcg > 7:219380/1‑149 (MQ=255) tACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAgcg > 5:114073/1‑149 (MQ=255) ccGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAgcggc < 2:178147/149‑1 (MQ=255) ccGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAgcggc > 6:49873/1‑149 (MQ=255) ccGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACATCCTCGCTCACCCGCATCATCGGCAAGAgcggc > 8:41904/1‑149 (MQ=255) gCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAg < 6:102644/149‑1 (MQ=255) aCTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCg < 5:319148/149‑1 (MQ=255) gCAGCCTCAACTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGTGGGCTGCTGCTGACGGTCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCgatga < 7:75936/149‑1 (MQ=255) gCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGCCCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCCTCGGCAAGAGCGGCGGGCtgatga > 8:304841/1‑149 (MQ=255) gCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCgatga < 4:119422/149‑1 (MQ=255) aGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCgg > 7:29091/1‑127 (MQ=255) aGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCgg < 8:29091/127‑1 (MQ=255) aCCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGCCCGGCAAGCTGGTCAGCACC‑CATACCGAAACCGGCCTCCCCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCaaa > 3:287556/1‑148 (MQ=255) aCCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCa < 4:287556/147‑1 (MQ=255) aCCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAg > 7:2447/1‑149 (MQ=255) aCCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAg < 8:152337/149‑1 (MQ=255) aCCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAg > 2:383533/1‑149 (MQ=255) aCCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCAGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCACATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAg < 5:354642/149‑1 (MQ=255) ggCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGc < 6:395562/147‑1 (MQ=255) gCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTc < 1:383533/149‑1 (MQ=255) aaCAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAg < 5:32835/141‑1 (MQ=255) aaCAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAg > 6:32835/1‑141 (MQ=255) aaCAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGa > 4:259589/1‑149 (MQ=255) aCAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGAc < 6:114073/149‑1 (MQ=255) ccGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGc < 3:46426/149‑1 (MQ=255) gTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCa > 6:112775/1‑149 (MQ=255) tCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCAt < 4:30234/149‑1 (MQ=255) aCTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATg < 5:49873/148‑1 (MQ=255) gTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGcc > 5:140834/1‑149 (MQ=255) aaCGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCTCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATgg > 1:299942/1‑149 (MQ=255) aaCGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATgg < 7:107885/148‑1 (MQ=255) aaCGCCGCCACCTGGGGGCTGCGGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATggg < 2:360316/149‑1 (MQ=255) gccgccACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGa < 7:113262/149‑1 (MQ=255) cACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGt > 8:26665/1‑149 (MQ=255) ccTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTc < 8:219380/149‑1 (MQ=255) gggggCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGt > 6:315408/1‑148 (MQ=255) ggCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAACCCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCAcc < 5:62909/149‑1 (MQ=255) ctgctgACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCga < 3:167678/149‑1 (MQ=255) tgctgACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGc > 3:197452/1‑146 (MQ=255) gctgACCAGCTTGCCGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTCATGTGTGAGCAGTTCGTCACCGGCgcga > 7:357070/1‑149 (MQ=255) ctgACCAGCTTGCCGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCga < 1:21843/146‑1 (MQ=255) ctgACCAGCTTGCCGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCga > 2:21843/1‑146 (MQ=255) ccGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCAtt < 6:140834/149‑1 (MQ=255) cGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCa < 1:151279/126‑1 (MQ=255) cGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTg > 3:791/1‑149 (MQ=255) cGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCAACATCGGCAAGAGCGGCGAGCCGATGATCCGCAACGGCGACGACATGGCCATCCGCCTGATTGGTGAGCa > 2:151279/1‑126 (MQ=255) gCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTGcc > 7:25574/1‑149 (MQ=255) aGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTGCCGaa < 3:259589/149‑1 (MQ=255) cTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTGCCGAAGc < 5:307865/149‑1 (MQ=255) cTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTGCCGAAGc > 4:386327/1‑149 (MQ=255) | CTGCTGCGTATCCCCGACAAAGGTACCCGTGATGCGCTGATCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACC‑CATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCAAGAGCGGCGAGCCGATGATCCGCAAGGGCGTCGACATGGCCATGCGCCTGATGGGTGAGCAGTTCGTCACCGGCGAGACCATTGCCGAAGC > NC_002947/5630978‑5631267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |