Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,669,964 | C→G | 8.9% | H147Q (CAC→CAG) | metF → | 5,10‑methylenetetrahydrofolate reductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,669,964 | 0 | C | G | 8.9% | 255.4 / 11.2 | 87 | H147Q (CAC→CAG) | metF | 5,10‑methylenetetrahydrofolate reductase |
Reads supporting (aligned to +/- strand): ref base C (37/42); new base G (3/5); total (40/47) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.21e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.22e-01 |
GCTGGCCGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCTACTTCTACTTCGTC > NC_002947/5669817‑5670111 | gctgGCCGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCAcc > 1:390366/1‑149 (MQ=255) ctgGCCGAGTACAAGGCAGGCGGCATCAAACGGATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCt < 5:321254/149‑1 (MQ=255) ctgGCCGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGTCGTCGGGCATGTGCATGGCGAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCt < 6:367284/149‑1 (MQ=255) gCCGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTgg > 8:280240/1‑148 (MQ=255) cGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCAGGTGGAAg < 8:65196/149‑1 (MQ=255) cGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAg > 5:217194/1‑149 (MQ=255) gAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGt < 1:313101/149‑1 (MQ=255) gAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGt > 7:117212/1‑149 (MQ=255) gTACAAGGCAGCCTGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTgg < 3:302417/149‑1 (MQ=255) tACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGc > 5:222595/1‑149 (MQ=255) tACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGc > 6:305288/1‑149 (MQ=255) cAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCt < 1:40285/148‑1 (MQ=255) aaGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCAGGTGGAAGTgatcag < 4:318783/149‑6 (MQ=255) aaGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGc > 6:244216/1‑149 (MQ=255) ggCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCAGGTGGAAGTgatcagcg < 6:306072/149‑8 (MQ=255) gCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTa > 5:176300/1‑149 (MQ=255) aGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTAcc > 8:63681/1‑149 (MQ=255) aGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTAcc < 8:49370/149‑1 (MQ=255) aTCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAAt < 4:220688/149‑1 (MQ=255) aTCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAAt > 5:244843/1‑149 (MQ=255) aaCGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCAc < 8:328345/149‑1 (MQ=255) aCGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGCAAGTGGCTGCCTACCCGGAAATGCAcc > 3:252141/1‑149 (MQ=255) cGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCAccc < 4:83445/149‑1 (MQ=255) cGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCAccc < 1:78580/149‑1 (MQ=255) tCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGgcg > 7:152260/1‑149 (MQ=255) cgcTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGgcgcgc < 8:152260/149‑1 (MQ=255) cgcTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGgcgcgc < 6:244843/149‑1 (MQ=255) gcTGCGTGGTGACCTGCCGTCGGGCATGGGAATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTAATCCGCGAGGAGACCGCTGATCACTTACACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGgcgcgc > 7:255068/1‑148 (MQ=255) cGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACtt < 4:252141/149‑1 (MQ=255) ggtgACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTc > 1:112494/1‑147 (MQ=255) gtgACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAg < 7:63681/149‑1 (MQ=255) tgACCTGCCGTCGGGCTTGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAgg > 7:159074/1‑149 (MQ=255) aCCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCg < 6:222595/149‑1 (MQ=255) aCCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCg > 1:259533/1‑149 (MQ=255) aCCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCg < 3:136726/149‑1 (MQ=255) ccTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCgg < 3:9552/149‑1 (MQ=255) gCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATc > 6:256728/1‑149 (MQ=255) ccGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGAt < 1:101426/147‑1 (MQ=255) ccGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCt > 6:348896/1‑149 (MQ=255) ccGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCt < 8:117212/149‑1 (MQ=255) gTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTgg > 3:343661/1‑149 (MQ=255) tCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGc > 4:229998/1‑149 (MQ=255) gcatgggcatggCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAAc < 5:244216/149‑1 (MQ=255) catgggcatgtCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTAGCCTGAAATTCACCCGCATGCGAGCAACTTC‑GAGGCGGATATgttcaagt < 6:285367/149‑8 (MQ=255) ggcatggCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTtgt < 3:229998/149‑1 (MQ=255) ggcatggCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTtg < 3:283503/148‑1 (MQ=255) gcatggCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCg > 7:81061/1‑131 (MQ=255) gcatggCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCg < 8:81061/131‑1 (MQ=255) tggCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGcac < 6:206640/149‑1 (MQ=255) tggtgAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCa < 8:159074/149‑1 (MQ=255) aaCTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGcc < 2:259533/149‑1 (MQ=255) tGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGt > 4:214486/1‑149 (MQ=255) cgcTATGCCAGTGACCTGTTCGAGGTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGt < 4:82310/147‑1 (MQ=255) gcTATGCCAGTGACCTGGTCGATTTCATCCGCGATGAGACCGCTGATCACTTCCACCTGGAAGTGGCTTCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGcc < 8:255068/149‑1 (MQ=255) gcTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCAGCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGcc < 2:390366/149‑1 (MQ=255) ccAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGTAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAg < 5:305288/148‑1 (MQ=255) gTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGcc < 7:280240/149‑1 (MQ=255) aCCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCAt > 5:306525/1‑148 (MQ=255) tGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCAcc > 3:214832/1‑149 (MQ=255) gTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCAcc > 4:191617/1‑147 (MQ=255) gAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTa > 2:179688/1‑149 (MQ=255) gTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTAct > 2:207569/1‑149 (MQ=255) gTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTAct > 4:163554/1‑149 (MQ=255) ttCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTActt > 1:22725/1‑149 (MQ=255) aTCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATc < 6:375824/135‑1 (MQ=255) aTCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATc > 5:375824/1‑135 (MQ=255) tCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACttcttc < 6:217194/149‑1 (MQ=255) cgcgAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCaa < 4:343661/149‑1 (MQ=255) cgcgAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCa < 5:348896/148‑1 (MQ=255) gcgAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAAc > 8:159519/1‑149 (MQ=255) gaggagACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGc < 3:191617/149‑1 (MQ=255) cGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGc > 6:356623/1‑148 (MQ=255) cTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctac > 2:392782/1‑149 (MQ=255) agccACTTCCAGGTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctactt > 7:317462/4‑149 (MQ=255) tCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctacttc > 3:65266/1‑148 (MQ=255) ccACTTCCAGGTGGAAGTGGCTGCCTACCCGGAAATGGACCCTCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCTAGGCCGGTGCCGACAGCGCCATCACCCAGTActtct < 3:335107/127‑1 (MQ=255) ccACTTCCAGGTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTCGGGGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctacttc > 1:115409/2‑149 (MQ=255) ccACTTCCAGGTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctacttc > 8:104406/2‑148 (MQ=255) ccACTTCCACGTGGAAGTGGCTGCCTACCCGGAAATGCACCCCCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTAGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCACTActtct > 4:335107/2‑128 (MQ=255) aCTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCCGTACTTCTTCAACGCCGACAGctacttctac < 3:341154/149‑1 (MQ=255) aCTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctacttctac < 1:392782/149‑1 (MQ=255) aCTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGctacttcta < 3:214486/148‑1 (MQ=255) ccACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCtacttctacttc < 6:23939/148‑1 (MQ=255) ccACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCtacttctacttc > 5:23939/1‑148 (MQ=255) ccACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCTACTTCTACTtcg > 2:121465/1‑149 (MQ=255) aCCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCTACTTCTACTtcgtc > 8:129336/1‑149 (MQ=255) aCCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCTACTTCTACTtcgtc < 6:306525/149‑1 (MQ=255) aCCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCTACTTCTACTtcgtc < 4:214832/149‑1 (MQ=255) | GCTGGCCGAGTACAAGGCAGCCGGCATCAAACGCATTGTCGCGCTGCGTGGTGACCTGCCGTCGGGCATGGGCATGGCCAGTGGTGAACTGCGCTATGCCAGTGACCTGGTCGAGTTCATCCGCGAGGAGACCGCTGATCACTTCCACCTGGAAGTGGCTGCCTACCCGGAAATGCACCCGCAGGCGCGCAACTTC‑GAGGCGGATCTGGCCAACTTTGTGCACAAGGTCAAGGCCGGTGCCGACAGCGCCATCACCCAGTACTTCTTCAACGCCGACAGCTACTTCTACTTCGTC > NC_002947/5669817‑5670111 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |