| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,751,729 | G→T | 11.9% | intergenic (‑167/‑304) | thiI ← / → glnA | tRNA sulfurtransferase/glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,751,729 | 0 | G | T | 11.9% | 216.9 / 18.2 | 82 | intergenic (‑167/‑304) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base G (32/37); new base T (5/5); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.24e-01 | |||||||||||
GGGCCTGCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGC > NC_002947/5751581‑5751873 | ggggCTTCCGAAAATGAGGGGAGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCg < 4:135596/149‑1 (MQ=255) gCCTGCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGt < 1:234019/149‑1 (MQ=255) ccGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCaaa < 1:219941/149‑1 (MQ=255) cGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAg < 4:172540/149‑1 (MQ=255) gAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGc > 6:87520/1‑149 (MQ=255) aaaaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGTGGGTAAACCCGCTCCTACGGGCTTTGCaccgcc > 2:145840/1‑144 (MQ=39) aaaaTGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGcc < 2:325173/149‑1 (MQ=255) aGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAg < 6:40335/148‑1 (MQ=255) ggggCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAg > 5:181814/1‑147 (MQ=255) cgcgAATTATATCGGAAATTGCTCAGGATTTGAGCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCgg < 2:262525/149‑1 (MQ=255) cgcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCgg < 2:92819/149‑1 (MQ=37) gcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTa > 5:161157/1‑141 (MQ=255) gcgAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTa < 6:161157/141‑1 (MQ=255) gAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGTGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGtt < 5:167497/149‑1 (MQ=255) gAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGtt > 2:352825/1‑149 (MQ=255) aaTTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGttt < 4:32376/149‑1 (MQ=255) atatCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCCCCCCTACAAGCCGTGCAAAACCCCTAAGAACCGGTTTAacc > 2:186152/1‑149 (MQ=255) tatCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTAGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTAccc < 1:129495/148‑1 (MQ=255) atCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCATCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCcgc > 5:291299/1‑149 (MQ=255) tCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGTGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCcgc < 1:145840/148‑1 (MQ=25) gAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGccc < 6:226698/125‑1 (MQ=255) gAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCGCGCCTACAGGCGGTGCAAAGccc > 5:226698/1‑125 (MQ=255) gAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCCCCCCAACAGGCGGTGCAAACCCCCGAGGCCCGGGTTTGCCcccg > 8:60939/1‑146 (MQ=255) gCTCAGGATTTGACCAACTTTTGATCAGATCCTTGGAGATAATCGCTGCGGCCAGGTTTTGCCGCGCGTGTTCCGGCCCTTTCGCGGGAAAACCCGCGCCTACCGGCGGTGCAAAGCCCGTAGTAGCGGGTTTACCCGCGAAGAGGcc < 6:235095/148‑1 (MQ=37) tCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGt < 5:122405/129‑1 (MQ=25) tCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGt > 6:122405/1‑129 (MQ=25) tCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGccc > 4:302276/1‑147 (MQ=255) aGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAACTGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTa < 7:328803/147‑1 (MQ=255) aGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCTTTGCACCGCCTGTAGgcgc < 4:213865/123‑1 (MQ=37) aGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCTTTGCACCGCCTGTAGgcgc > 3:213865/1‑123 (MQ=37) tttGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCt > 3:288114/1‑149 (MQ=255) ttaCCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCTGGTAAACCCGCGCCTACAGGCGTTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTg < 6:157008/146‑1 (MQ=255) gACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTgg < 1:352825/148‑1 (MQ=255) gACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTgg < 6:181814/148‑1 (MQ=255) aCCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGca > 7:199626/1‑149 (MQ=255) cAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCCCCTAAAGGCCGTGCAAAGCCCGTAGGAGCGGGTTTAACCGCGAACACGCCCAAGAAACAGGcaca > 1:393511/1‑149 (MQ=38) ttGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACt > 2:115309/1‑148 (MQ=255) gATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGAGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcac > 8:8932/1‑149 (MQ=255) aGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCCCTcacgccc > 2:19094/1‑148 (MQ=255) gAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCATAGAACCTGGCACACCACTcacgccac > 3:100273/1‑149 (MQ=255) aGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcacgccac‑gc < 8:199626/149‑1 (MQ=255) tGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCAcc < 1:178115/147‑1 (MQ=255) gaTAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTGCGCGGGTAAACCCGCGCCTACAGGCGGGGAAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTAt < 1:186152/148‑1 (MQ=255) aTAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCAACAGGCGGTGCAAAGACCGTAGGCGCGGGGTTTCCCGCGAAGAGGCCCGAGAACCAGGCCCACCACCCACGCCAC‑GCCACCGATTg > 5:53383/1‑149 (MQ=37) aTAAATGCAGAGGCCAGGTTTTCCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTg < 7:60939/149‑1 (MQ=255) aaaTGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCAAC‑GCACCCTATTGGt > 7:386328/1‑149 (MQ=255) aaTGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGt < 7:8932/148‑1 (MQ=255) aTGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGc < 8:386328/149‑1 (MQ=255) agGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGacac > 7:312348/1‑148 (MQ=255) gCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACACGCCCCAACAAGCGGTGCAAAACCCGTAAGATCGGGTTTAACCGCGAAAAGGCCCAAGAACCTGGCACACACCTCACGCCAC‑GCACCCTATTGGTGCGACAAGa > 4:151980/1‑148 (MQ=255) cAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTTAACCCGCGCCTACAGGCGGTGCAAAGCCCGGAGGAGCGGGTTTTCCCGCGAAGAGGCCCGAGAACCTGGCCCCCCACTCACGCCCC‑GCCCCCTATTGGTGCGCCACGATc > 5:31817/1‑148 (MQ=255) cAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcacg > 7:370756/1‑120 (MQ=255) cAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTcacg < 8:370756/120‑1 (MQ=255) cAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAAACCCCGCCAAAAGGCCGTGCAAAGCCCGTATGAGCGGGTTTAACCGCGAAGAGGCCCGAGAACCTGGCACACCACACACCCCAC‑GCCCCCAATTTGTGCGACACCATc > 4:390060/1‑148 (MQ=255) aGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTTCCCGCGAAGAGGCCCTAGAACCTGGCCCCCCACTCACGCCCC‑GCACCCTATTGGTGGGACACGATCa > 7:360721/1‑148 (MQ=39) ggTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCaa > 6:338407/1‑148 (MQ=255) gTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCaaa > 6:328396/1‑148 (MQ=255) tGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAAc < 1:103082/148‑1 (MQ=255) cAGCGCCTGTTCCGGCCCTTTCGCTGGTAAACCCGCGCCTACAGGCGGTGAAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCa < 3:151980/149‑1 (MQ=255) aGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCAt < 5:338407/149‑1 (MQ=255) cgcCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGc < 5:382660/145‑1 (MQ=255) cgcCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGc > 6:382660/1‑145 (MQ=255) gcCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCg > 1:16385/1‑148 (MQ=255) ccTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGt > 2:20072/1‑148 (MQ=255) ttCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAgg < 4:288114/148‑1 (MQ=255) ccGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGt < 5:87520/148‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCCCGCCAC‑GCACCCGATTTGTGCGACACGAACAAAAAACGCAACGTAAGGGtt > 6:21476/1‑147 (MQ=38) ccTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGCACCTGGCACACCCCTCACGCCCC‑GCACCCTATTGGTGGGACACGATCAAAAAACGCATCGTAAGGGTGCACtt > 5:404837/1‑149 (MQ=255) gggTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGc < 2:16385/149‑1 (MQ=255) gTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTa < 5:328396/149‑1 (MQ=255) tAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCTCTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTaa > 5:304913/1‑149 (MQ=255) tAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTaa < 3:302276/149‑1 (MQ=255) aaCCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACTACACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAAc < 1:115309/149‑1 (MQ=255) aaCCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGCCACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAAcc > 7:118610/1‑149 (MQ=255) aaCCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAAcc < 8:312348/149‑1 (MQ=255) cccGCTCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAAccc > 8:105394/1‑148 (MQ=37) cgctCCTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc > 8:84693/1‑149 (MQ=37) cgcgCCTACCGGCGGTGAAAAGCCCTTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAAc < 6:53383/149‑1 (MQ=255) cgcCTACAGGCTGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCAGACGACTCACGCCAC‑GCACCCTATTCGTGCGACACAATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGc < 7:259003/149‑1 (MQ=255) cAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCaaa < 6:291299/147‑1 (MQ=255) aGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAAt > 7:113109/1‑147 (MQ=255) aGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAAt < 8:113109/147‑1 (MQ=255) aGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGc > 3:174778/1‑149 (MQ=255) | GGGCCTGCCGAAAATGAGGGGCGCGAATTATATCGGAAATTGCTCAGGATTTGACCAACTTTTGATCAGAAGCTTTGAGATAAATGCAGAGGCCAGGTTTTGCAGCGCCTGTTCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCAC‑GCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGC > NC_002947/5751581‑5751873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |