| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,023,159 | G→A | 6.6% | intergenic (+74/+70) | PP_5273 → / ← PP_5274 | oxidoreductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,023,159 | 0 | G | A | 6.6% | 272.1 / 5.8 | 90 | intergenic (+74/+70) | PP_5273/PP_5274 | oxidoreductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (43/41); new base A (2/4); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01 | |||||||||||
GCGGCAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTC > NC_002947/6023015‑6023300 | gcggcAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGc < 7:278704/148‑1 (MQ=255) aaGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTc > 4:89129/1‑149 (MQ=255) aGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTcc < 5:260816/149‑1 (MQ=255) aGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCACGCCC‑GCTcc < 6:339099/149‑1 (MQ=255) aGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCACGCCC‑GCTcc < 6:137426/149‑1 (MQ=255) aGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCACGCCC‑GCTcc < 5:146524/149‑1 (MQ=255) cACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCca < 8:84735/149‑1 (MQ=255) cTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAg > 6:298907/1‑149 (MQ=255) cgcTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGt < 1:69410/149‑1 (MQ=255) cgcTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATACTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAgg < 7:887/147‑1 (MQ=255) tCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTACAAGCTGACGCGCCCACTGTGGGAGCGGGCGTGCCA‑GCTCCCACAGGGTCgg > 4:315610/1‑149 (MQ=255) gcgcTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCaa < 2:309709/149‑1 (MQ=255) gcgcTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCaa < 2:334833/149‑1 (MQ=255) gcTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGt > 2:324304/1‑149 (MQ=255) ggAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTgg > 2:39844/1‑149 (MQ=255) gAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGTCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTggg < 1:76458/149‑1 (MQ=255) gAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCCAGCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTgg < 1:54984/149‑1 (MQ=255) gAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTggg < 1:39844/149‑1 (MQ=255) gAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTggg < 8:156105/149‑1 (MQ=255) gAATGCTGTCTCATCGCGTCAAAGTGCTGCCTTGAATGTCCACATCGTTGTGGCAGCAACTGCCTTGCTTAAAATCTAAATGCTGACGCGCCCCCTGTGGGAGGGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTggg < 4:220332/149‑1 (MQ=38) aaTGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTggg > 5:49752/1‑148 (MQ=255) aaTGCTGGGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGCGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTgggg < 8:301007/149‑1 (MQ=255) cTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGaac > 8:27510/1‑148 (MQ=255) cTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCGGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGaac < 2:329338/148‑1 (MQ=255) tgtgGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGaaca > 8:136267/1‑148 (MQ=255) gCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAgg > 5:383822/1‑149 (MQ=255) aTCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCAC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGca > 8:163924/1‑148 (MQ=255) ccTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTc > 1:358590/1‑148 (MQ=255) cTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTc > 6:333977/1‑147 (MQ=255) cTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCa > 2:133046/1‑149 (MQ=255) aaaGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGACCAACCGGCCCTCCAGCg > 2:116448/1‑149 (MQ=255) aaaGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGc < 5:298907/148‑1 (MQ=255) agagCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGAc > 7:374060/1‑149 (MQ=255) agagCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGAc < 6:383822/149‑1 (MQ=255) cTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATc < 1:133046/149‑1 (MQ=255) gACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCGCCCACAGGGTCGGTGCAAGGTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGCCCATCgt > 6:74197/1‑149 (MQ=255) aCTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgtg > 2:394967/1‑149 (MQ=255) aCTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgt < 1:112405/148‑1 (MQ=255) aCTTGAAAGTCCACATCCTTGGGGCAGCACCTGTCTTGCTTAAAATATAAAAGCTGACGCGCCCCCTGTGGGAGCTGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGTCCCTCCAGCGACCATCgt < 3:315610/148‑1 (MQ=255) cTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgtgt < 3:89129/149‑1 (MQ=255) ttGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCgtgt > 2:314402/1‑148 (MQ=255) gAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAg > 6:42059/1‑149 (MQ=255) aaaGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAg < 6:49752/148‑1 (MQ=255) aaaGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCCGGCGTGCCA‑GCTCCCCAAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAg > 7:222622/1‑148 (MQ=255) aGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTcc < 7:136267/149‑1 (MQ=255) cccTTCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGGAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTc < 1:314402/148‑1 (MQ=255) cccATCGTTGTGGCAGCAACTGTGTTGCTTAAAATCTAAAAGGTGACGCGCCCCCTGTGGGAGGGGGGGTGCCC‑GCTCACACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTcc < 2:358590/149‑1 (MQ=255) cccATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTcc < 1:113148/149‑1 (MQ=255) cccATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTc > 7:142753/1‑148 (MQ=255) cccATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTc > 1:73392/1‑148 (MQ=255) cATCCTTGTGGCAGCAACTGCCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCATTc > 2:329680/1‑146 (MQ=255) cTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAgg > 7:89708/1‑149 (MQ=255) gcagcaACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTc < 8:291033/148‑1 (MQ=255) cagcaACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCg > 7:185640/1‑149 (MQ=255) agcaACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTc < 4:183326/86‑1 (MQ=255) agcaACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTc > 3:183326/1‑86 (MQ=255) caACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGccc < 1:324304/149‑1 (MQ=255) tGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCg < 2:73392/149‑1 (MQ=255) tCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGaacaa > 8:39492/1‑93 (MQ=255) ttGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATcc > 4:255585/1‑149 (MQ=255) tGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTcc < 6:353990/120‑1 (MQ=255) tGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTcc > 5:353990/1‑120 (MQ=255) gCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCgg > 3:169387/1‑149 (MQ=255) ttAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCtt < 3:94275/139‑1 (MQ=255) ttAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCtt > 4:94275/1‑139 (MQ=255) ttAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGc > 5:389543/1‑149 (MQ=255) aaaaTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCt > 8:71827/1‑149 (MQ=255) aaTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCtt > 3:357133/1‑135 (MQ=255) aaTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCtt < 4:357133/135‑1 (MQ=255) aTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCt > 7:171660/1‑149 (MQ=255) aTCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCt < 5:42059/149‑1 (MQ=255) tAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTccc < 3:255585/149‑1 (MQ=255) aaaGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTccc < 8:185640/147‑1 (MQ=255) aaaGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAg < 7:71827/149‑1 (MQ=255) aaaGCTGACGCACCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAg > 7:358065/1‑149 (MQ=255) gCTGACGCGCCCCCTGAGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTc > 5:198465/1‑149 (MQ=255) cTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGccc > 2:297148/1‑123 (MQ=255) cTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGccc < 1:297148/123‑1 (MQ=255) gcgcCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCa > 7:72119/1‑94 (MQ=255) gcgcCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCa < 8:72119/94‑1 (MQ=255) gcCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGa > 8:159580/1‑148 (MQ=255) acccTGTGGGAGCGGGCACGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACAt > 2:359107/2‑149 (MQ=255) cccTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATc > 3:72895/1‑149 (MQ=255) cTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATcgc < 4:169387/149‑1 (MQ=255) tgtgGGAGCGGGCACGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAgg > 1:65162/1‑100 (MQ=255) tgtgGGAGCGGGCACGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAgg < 2:65162/100‑1 (MQ=255) ggAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAAc > 8:199447/1‑149 (MQ=255) gAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACt > 5:45418/1‑149 (MQ=255) aGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTc < 6:198465/149‑1 (MQ=255) aGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGCAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTc < 2:335333/149‑1 (MQ=255) | GCGGCAAGCACCTGCGCTCGCCACTGCTGGCGCTGGGAATGCTGTGGCATCGCCTCAAAGAGCTGACTTGAAAGTCCCCATCCTTGTGGCAGCAACTGTCTTGCTTAAAATCTAAAAGCTGACGCGCCCCCTGTGGGAGCGGGCGTGCCC‑GCTCCCACAGGGTCGGTGCAAGTTTCAAGTCTGGGGAACAACAGGCCCTCCAGCGACCATCGTGTCAGTCCTTCCAGAAGGGTTTCCGCCCTTCGATCCGGGCCTGCTCCCAGCTCAGCCCGACATCGCGCAACTC > NC_002947/6023015‑6023300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |