| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 625,063 | A→T | 6.7% | intergenic (‑157/+26) | PP_0537 ← / ← ppa | transcriptional regulator/inorganic pyrophosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 625,063 | 0 | A | T | 6.7% | 358.8 / 9.9 | 118 | intergenic (‑157/+26) | PP_0537/ppa | transcriptional regulator/inorganic pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base A (60/50); new base T (5/3); total (65/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
TGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGCTC > NC_002947/624916‑625211 | tgtAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCa > 4:322346/1‑148 (MQ=255) ggcggGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg < 2:242616/149‑1 (MQ=255) ggcggGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg < 6:210852/149‑1 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttcat < 5:185409/149‑6 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCt < 8:235985/148‑1 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg > 2:120906/1‑149 (MQ=255) cAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg < 4:113645/139‑1 (MQ=255) cAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg > 3:113645/1‑139 (MQ=255) aGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTg > 2:6536/1‑147 (MQ=255) aGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTACATTCAGGCATGAAAAAACCAGCCAAAGCGGGGTTTCACTGCa > 7:251482/1‑149 (MQ=255) tAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGt > 5:399466/1‑149 (MQ=255) ggAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCg > 3:387513/1‑148 (MQ=255) gAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGaa < 6:399466/149‑1 (MQ=255) aaaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGaa < 3:216275/148‑1 (MQ=255) aaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAAt > 7:362326/1‑149 (MQ=255) aaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAAt < 4:387513/149‑1 (MQ=255) cGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTcc > 2:316144/1‑129 (MQ=255) gggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCtt < 3:393329/149‑1 (MQ=255) tGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑Agg > 8:185787/1‑148 (MQ=255) gggATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTc < 5:410668/126‑1 (MQ=255) gggATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTc > 6:410668/1‑126 (MQ=255) gATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCtt < 2:133078/137‑1 (MQ=255) gATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCtt > 1:133078/1‑137 (MQ=255) gATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGa > 5:338331/1‑148 (MQ=255) aTTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGc < 6:176631/145‑1 (MQ=255) tGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGa < 5:172224/148‑1 (MQ=255) cGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTgg < 4:99609/149‑1 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGt > 2:121802/1‑149 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGt > 7:372573/1‑149 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACAGATTTGGt > 7:75106/1‑149 (MQ=255) gCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCgg > 4:201947/1‑149 (MQ=255) tAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTGCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGggcg > 1:105142/1‑149 (MQ=255) tAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTg < 5:223948/131‑1 (MQ=255) tAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTg > 6:223948/1‑131 (MQ=255) tAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGggcg > 7:273248/1‑149 (MQ=255) tGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATc > 5:335515/1‑129 (MQ=255) ggTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTgg < 8:16059/123‑1 (MQ=255) gtgtAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACGCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgc < 8:75106/147‑1 (MQ=255) gtAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCt > 6:199803/1‑149 (MQ=255) gACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTc < 8:186125/138‑1 (MQ=255) gACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTc > 7:186125/1‑138 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGt < 5:258262/112‑1 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGt > 6:258262/1‑112 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCt > 1:306673/1‑149 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCt > 5:380567/1‑149 (MQ=255) gtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCtt > 5:107947/1‑149 (MQ=255) gtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCtt > 3:329358/1‑149 (MQ=255) tAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgc > 1:280709/1‑134 (MQ=255) tAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgc < 2:280709/134‑1 (MQ=255) ggATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGa < 5:135630/149‑1 (MQ=255) gATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGAt > 1:280579/1‑149 (MQ=255) gATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGAt < 2:280579/149‑1 (MQ=255) gATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGAt > 3:21442/1‑149 (MQ=255) aTTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATc < 1:6536/149‑1 (MQ=255) tttGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGt < 4:226126/86‑1 (MQ=255) tttGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGt > 3:226126/1‑86 (MQ=255) tGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAATCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTCAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCt < 1:120906/148‑1 (MQ=255) tGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCtt < 5:199803/148‑1 (MQ=255) ccAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCa > 4:123106/1‑149 (MQ=255) gcagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACtt > 4:153280/1‑149 (MQ=255) gcagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACtt < 6:338331/149‑1 (MQ=255) tGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGccc < 3:201947/149‑1 (MQ=255) tGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGccc > 3:369372/1‑149 (MQ=255) aGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCt > 4:325828/1‑148 (MQ=255) gTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCga < 7:185787/149‑1 (MQ=255) cATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGAGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATc > 4:32019/1‑149 (MQ=255) aTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt < 1:121802/149‑1 (MQ=255) aTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt < 5:236964/149‑1 (MQ=255) tCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGcc < 1:150441/134‑1 (MQ=255) cAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 3:325828/148‑1 (MQ=255) cAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 8:362326/148‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCg < 8:309803/139‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCg > 7:309803/1‑139 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGt < 8:372573/149‑1 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg < 7:229350/146‑1 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg > 8:229350/1‑146 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAg < 4:21442/149‑1 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg > 6:24775/1‑149 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTTCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTa > 6:244852/3‑143 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTTCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTa < 5:244852/141‑1 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg > 6:314579/3‑148 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg > 1:358035/3‑148 (MQ=255) aaaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg < 2:105142/148‑1 (MQ=255) gaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTg > 8:371737/2‑65 (MQ=37) gaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTg < 7:371737/64‑1 (MQ=37) aaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGc > 3:387993/1‑148 (MQ=255) aaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTGCGATCTTGACCCACTTGCCCTTCTCGACATCTTTGTAGTTGGCa > 4:279412/1‑148 (MQ=255) aCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaag < 6:380567/149‑1 (MQ=255) ccccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaaga < 2:251032/149‑1 (MQ=255) ccccGCCAAAGCGGGGTTTCCCAGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaag > 1:284027/1‑148 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGGCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTTGCAaagaa < 6:240267/149‑1 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaa < 3:322346/149‑1 (MQ=255) cccGCCAAAGCGGGGTTTACCTGCAGTCGAAATCAGCCCTTGT‑AGGAATAGACACATTTCGTGATACCGGCACGGGCGGCGTCGTCGCCTTCCCACCCTTCGATCTTGACCCACTAGACCTTCTCGAGATCTTTGTACTTCGCAaaga > 6:7989/1‑148 (MQ=255) cGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCtt > 5:193293/1‑105 (MQ=255) cGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCtt < 6:193293/105‑1 (MQ=255) cGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGt > 6:108036/1‑149 (MQ=255) cGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGt < 6:107947/149‑1 (MQ=255) cAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGTTTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGCt < 5:7989/149‑1 (MQ=255) cAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGCt > 3:400579/1‑149 (MQ=255) aaaGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGCTc < 3:32019/149‑1 (MQ=255) | TGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGT‑AGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTGCTC > NC_002947/624916‑625211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |