| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 650,231 | C→T | 5.5% | intergenic (‑75/+25) | accB ← / ← aroQ‑I | acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 650,231 | 0 | C | T | 5.5% | 269.3 / 3.9 | 90 | intergenic (‑75/+25) | accB/aroQ‑I | acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (45/40); new base T (2/3); total (47/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.13e-01 | |||||||||||
TCCTTGATCTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACG > NC_002947/650083‑650378 | tccttGATCTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAAcccc > 1:240250/1‑149 (MQ=255) cttGATCTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCgg > 2:406255/1‑149 (MQ=255) ttGATCTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGc > 3:133413/1‑149 (MQ=255) ttGATCTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGc > 2:139060/1‑149 (MQ=255) ctcCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACt > 5:180937/1‑149 (MQ=255) ccAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACt > 4:303830/1‑147 (MQ=255) cacttcttcTATGCCAGAATCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACt < 7:195288/143‑1 (MQ=255) cAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAg < 7:176176/149‑1 (MQ=255) gTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGc < 1:5626/149‑1 (MQ=255) gtcgATGCCAGACTCTTCCAGGAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATGAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAATCGTATCTGATACGTTTCTCTCGTACCCCGGCCCACTTAGGCCAg < 6:55939/148‑1 (MQ=255) gtcgATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg < 6:84366/149‑1 (MQ=255) gATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGtt < 4:195810/149‑1 (MQ=255) tGCCAGACTCTTCCGGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGtttt < 1:327071/149‑1 (MQ=255) ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGttcga < 4:133413/148‑4 (MQ=255) ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtca < 5:328741/149‑1 (MQ=255) ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc < 7:312394/148‑1 (MQ=255) cAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGGGGttcgaga < 5:248313/149‑6 (MQ=255) cAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcat > 2:16166/1‑149 (MQ=255) cAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtca > 3:78372/1‑148 (MQ=255) cAGACTCTTCCAGCAGCTCGATCAGTTCCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtca > 3:323493/1‑148 (MQ=255) aGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcatc < 5:108454/149‑1 (MQ=255) aCTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTcatcat < 3:303830/149‑1 (MQ=255) ctctTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCAtt < 7:307709/149‑1 (MQ=255) ttCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTgg > 8:366005/1‑149 (MQ=255) ttCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTgg > 2:314398/1‑149 (MQ=255) cagcagCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCt > 3:308139/1‑149 (MQ=255) cagcagCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCt > 5:29212/1‑149 (MQ=255) gcagcTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCtgt > 2:354441/1‑149 (MQ=255) gcagcTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCtgt < 4:78372/149‑1 (MQ=255) agcTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGc < 2:240250/149‑1 (MQ=255) tCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg > 6:201940/1‑124 (MQ=255) tCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg < 5:201940/124‑1 (MQ=255) tCAGTTTCTTGACTTTTCGGATTTCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCa < 6:3927/149‑1 (MQ=255) tCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTgg > 1:376409/1‑147 (MQ=255) tCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTgg > 1:370480/1‑147 (MQ=255) aGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAg < 8:206706/148‑1 (MQ=255) gACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCGCTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAgttgtt > 3:13075/1‑149 (MQ=255) gACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAgttgt < 1:406255/148‑1 (MQ=255) gACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAgtt < 7:366005/146‑1 (MQ=255) cTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTc > 5:363555/1‑148 (MQ=255) tACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAgc > 3:176025/1‑149 (MQ=255) cGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAgcgc < 1:179453/149‑1 (MQ=255) ggATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGcgcg < 4:323493/149‑1 (MQ=255) tatCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGAc < 7:75186/149‑1 (MQ=255) cATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCa < 4:308139/149‑1 (MQ=255) aTTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg < 3:62399/149‑1 (MQ=255) aTTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg < 1:354441/149‑1 (MQ=255) aTTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg > 3:86151/1‑149 (MQ=255) aTTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg > 2:31291/1‑149 (MQ=255) atcaACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTTCGTTGGCAGCCAGTTGTTCCAGCGCGGAGACAAGGGCCAgg > 7:374804/1‑149 (MQ=255) atcaACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAgg > 2:292243/1‑149 (MQ=255) atcaACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAgg > 7:353696/1‑149 (MQ=255) tcaACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGc < 8:18850/149‑1 (MQ=255) tCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg < 6:242121/81‑1 (MQ=255) tCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg > 5:242121/1‑81 (MQ=255) tCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATaa > 3:138267/1‑149 (MQ=255) cccAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAc > 8:84595/1‑149 (MQ=255) aGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTg < 1:292243/149‑1 (MQ=255) gTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGgc > 1:370339/1‑149 (MQ=255) ttCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGcc < 6:354356/131‑1 (MQ=255) ttCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTAGTTCCAGCGCGGACTCCAGGGcc > 5:354356/1‑131 (MQ=255) cGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCGCTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGgcgc < 4:13075/148‑1 (MQ=255) gTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGcc > 2:174166/1‑147 (MQ=255) aGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGa < 4:86151/148‑1 (MQ=255) cGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCg > 8:206773/1‑145 (MQ=255) aaaTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGAt > 7:113038/1‑148 (MQ=255) aTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTcc < 7:371421/96‑1 (MQ=255) aTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTcc > 8:371421/1‑96 (MQ=255) aTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAc < 6:29212/149‑1 (MQ=255) aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGTGATGTGCGTTGTCAGCCAGTTGTTAAAGCGCGGACTCCAGGGCCAGGCGATAACAGCTGTCGCCCAGACCGAAGATCAcccc > 5:60011/1‑148 (MQ=255) aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGACTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGTGCCCAGACCGCAGATCAcccc > 8:42295/1‑148 (MQ=255) aaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCAAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTa > 5:86519/1‑149 (MQ=255) tGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCg > 8:16182/1‑149 (MQ=255) tGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACAGAAGATCCCCCATACGGCCACATCg > 4:245989/1‑149 (MQ=255) gAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCg > 1:197228/1‑148 (MQ=255) gAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCg > 6:154854/1‑148 (MQ=255) aaaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCgg > 3:267341/1‑148 (MQ=255) aaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGc > 2:320653/1‑123 (MQ=255) aaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGc < 1:320653/123‑1 (MQ=255) aaCGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGa < 4:267341/148‑1 (MQ=255) cGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGaaaa > 2:12274/1‑149 (MQ=255) tttCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGt < 8:353696/149‑1 (MQ=255) ctctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAg < 4:176025/148‑1 (MQ=255) tgaaaaCCCTGGCCTAAGTGGGCCGGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTg < 2:302306/97‑1 (MQ=37) tgaaaaCCCTGGCCTAAGTGGGCCGGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTg > 1:302306/5‑101 (MQ=37) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgt > 4:87792/1‑149 (MQ=255) tcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgt > 6:273462/1‑149 (MQ=255) gAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgtgg < 2:197228/149‑1 (MQ=255) gAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgtgg > 4:31602/1‑149 (MQ=255) gAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCATACGGCAACATCGGAAAAGTAGGAgtg < 1:12274/148‑1 (MQ=255) aaCCCCGGCCCACTTATGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgtggt < 1:139060/149‑1 (MQ=255) cccGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGAc > 2:273291/1‑149 (MQ=255) cccGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGAc > 2:67480/1‑149 (MQ=255) ccGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACg < 7:84595/149‑1 (MQ=255) | TCCTTGATCTCCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACG > NC_002947/650083‑650378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |